DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB3 and pear1

DIOPT Version :10

Sequence 1:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster
Sequence 2:XP_017952446.2 Gene:pear1 / 100489801 XenbaseID:XB-GENE-6045593 Length:1087 Species:Xenopus tropicalis


Alignment Length:145 Identity:36/145 - (24%)
Similarity:56/145 - (38%) Gaps:35/145 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HLTSTLIGLLI---CGLGIELPTRTAAQFWS----------VDPVTQ---------WR--KEALA 42
            ||...::.:|:   .|..:.........||.          ..|.:|         |.  |....
 Frog     5 HLMIPIVWMLVQIQFGKSLSPNDPNVCSFWESFTLAVKESYTQPYSQLSPDSCDSSWNYFKACTP 69

  Fly    43 ERGSGICYRTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLAPEECECA 107
            ::   |.|||.....:..:.|.|.  :||.||.    ..|..|.|.|:::|.:|.|:||::|:|.
 Frog    70 QK---ILYRTAYRHRVKLDYRRRY--WCCKGYY----ESNDICVPRCTQECVHGRCIAPDQCQCE 125

  Fly   108 PGYYRSNKRCRFVLE 122
            ||:  ..|.|....|
 Frog   126 PGW--RGKDCSSACE 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 19/56 (34%)
pear1XP_017952446.2 EMI 28..98 CDD:462204 16/78 (21%)
EGF_CA 280..325 CDD:473889
Laminin_EGF 546..586 CDD:395007
Blue background indicates that the domain is not in the aligned region.

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