DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13516 and si:ch211-157c3.4

DIOPT Version :10

Sequence 1:NP_001033966.1 Gene:CG13516 / 3885599 FlyBaseID:FBgn0040658 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001157840.1 Gene:si:ch211-157c3.4 / 561592 ZFINID:ZDB-GENE-030131-8454 Length:149 Species:Danio rerio


Alignment Length:143 Identity:35/143 - (24%)
Similarity:55/143 - (38%) Gaps:22/143 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GNPIANGLPIEAPPSYDVA---VSVPVAP-----AVSAPAIAPARPPPVVVVEQPAPQPPTVVPT 85
            |.|....:|:|.....:|.   |..|..|     ..|...:|.:||    |..|........|..
Zfish     7 GTPPPYTIPVEDGKGSNVKVYHVHTPFTPQSSTYGASHAQVASSRP----VQSQSTEARNKYVSY 67

  Fly    86 DTLHLGPNRSRVLCPACGANKTTRMTHTANSRTHMVAGLLCLVGFCC-----CACFVPYCMNSCR 145
            ::..||...:...|.:|.....|.:|:    :..:.|.|:|::.|.|     | |.:|:.|...:
Zfish    68 ESYELGRKPAMATCTSCQQQVLTNVTY----KVGVYAWLMCILIFFCGFVLGC-CLIPFFMKFFK 127

  Fly   146 TGNHYCRKCNTFL 158
            ...|.|.:||..|
Zfish   128 DAYHSCPRCNKIL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13516NP_001033966.1 zf-LITAF-like 92..162 CDD:463165 18/72 (25%)
si:ch211-157c3.4NP_001157840.1 zf-LITAF-like 74..142 CDD:463165 18/72 (25%)

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