DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13516 and si:ch211-157c3.4

DIOPT Version :9

Sequence 1:NP_001033966.1 Gene:CG13516 / 3885599 FlyBaseID:FBgn0040658 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001157840.1 Gene:si:ch211-157c3.4 / 561592 ZFINID:ZDB-GENE-030131-8454 Length:149 Species:Danio rerio


Alignment Length:143 Identity:35/143 - (24%)
Similarity:55/143 - (38%) Gaps:22/143 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GNPIANGLPIEAPPSYDVA---VSVPVAP-----AVSAPAIAPARPPPVVVVEQPAPQPPTVVPT 85
            |.|....:|:|.....:|.   |..|..|     ..|...:|.:||    |..|........|..
Zfish     7 GTPPPYTIPVEDGKGSNVKVYHVHTPFTPQSSTYGASHAQVASSRP----VQSQSTEARNKYVSY 67

  Fly    86 DTLHLGPNRSRVLCPACGANKTTRMTHTANSRTHMVAGLLCLVGFCC-----CACFVPYCMNSCR 145
            ::..||...:...|.:|.....|.:|:    :..:.|.|:|::.|.|     | |.:|:.|...:
Zfish    68 ESYELGRKPAMATCTSCQQQVLTNVTY----KVGVYAWLMCILIFFCGFVLGC-CLIPFFMKFFK 127

  Fly   146 TGNHYCRKCNTFL 158
            ...|.|.:||..|
Zfish   128 DAYHSCPRCNKIL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13516NP_001033966.1 zf-LITAF-like 96..162 CDD:287559 18/68 (26%)
si:ch211-157c3.4NP_001157840.1 zf-LITAF-like 75..142 CDD:287559 18/71 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578978
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54946
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.960

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