DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13516 and litaf

DIOPT Version :10

Sequence 1:NP_001033966.1 Gene:CG13516 / 3885599 FlyBaseID:FBgn0040658 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001002184.1 Gene:litaf / 431731 ZFINID:ZDB-GENE-040704-23 Length:163 Species:Danio rerio


Alignment Length:163 Identity:42/163 - (25%)
Similarity:68/163 - (41%) Gaps:26/163 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PTAPSPTPTRELGNPIANGLPIEAPPSYD-VAVSVPVAPAVSAPA--IAPARPPPVVVVEQPAPQ 78
            ||||....|..:|:|        .||||| ::.:.|..||...|.  :..:.|||....|.....
Zfish     6 PTAPPMENTTLVGHP--------PPPSYDEISGANPYYPAGPYPPADMKASGPPPYPTQEYNQMY 62

  Fly    79 PPT---------VVPTDTLHLGPN------RSRVLCPACGANKTTRMTHTANSRTHMVAGLLCLV 128
            |||         ||...|:::.|.      ..:..||.|..:..||:.:::.....:....|.:.
Zfish    63 PPTAQGQPVTSPVVAVQTVYVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPLVWLSCAGLAVF 127

  Fly   129 GFCCCACFVPYCMNSCRTGNHYCRKCNTFLGAY 161
            |.....|.:|:|:...:...|:|..|::.||.:
Zfish   128 GCIYGCCLIPFCIEDLKDVTHHCPNCSSVLGVH 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13516NP_001033966.1 zf-LITAF-like 92..162 CDD:463165 16/76 (21%)
litafNP_001002184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/24 (29%)
PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 22..25 2/2 (100%)
zf-LITAF-like 93..161 CDD:463165 15/68 (22%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 116..136 3/19 (16%)

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