DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13516 and CG4250

DIOPT Version :9

Sequence 1:NP_001033966.1 Gene:CG13516 / 3885599 FlyBaseID:FBgn0040658 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster


Alignment Length:155 Identity:45/155 - (29%)
Similarity:65/155 - (41%) Gaps:58/155 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PIANGLPIEAPPSYDVAVSVPVAPAVSAPAIAPARPPPVVVVEQPAPQ----------------- 78
            |.|.|  .:||||||           |||             :|..||                 
  Fly    12 PQAPG--FQAPPSYD-----------SAP-------------QQVYPQLHQGQGVILQGENTENY 50

  Fly    79 -------PPTVVPTDTLHLGPNRSRVLCPACGANKTTRMTHTANSRTHMVAGLLCLVGFCCCACF 136
                   ||.|       ||...|...||:||..:.|::....:::||::|.|:|::|..||.| 
  Fly    51 ESIGNNAPPNV-------LGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCC- 107

  Fly   137 VPYCMNSCRTGNHYCRKCNTFLGAY 161
            :|||.:||::..|.|..|..::|.|
  Fly   108 IPYCTDSCQSAKHTCTSCGAYVGTY 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13516NP_001033966.1 zf-LITAF-like 96..162 CDD:287559 24/66 (36%)
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:287559 25/68 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448955
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2DZV6
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 53 1.000 Inparanoid score I4084
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D136484at33392
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 1 1.000 - - otm14624
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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