DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13516 and Y37D8A.6

DIOPT Version :9

Sequence 1:NP_001033966.1 Gene:CG13516 / 3885599 FlyBaseID:FBgn0040658 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_499672.1 Gene:Y37D8A.6 / 189614 WormBaseID:WBGene00012548 Length:132 Species:Caenorhabditis elegans


Alignment Length:165 Identity:45/165 - (27%)
Similarity:59/165 - (35%) Gaps:45/165 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQKRAMLYPQVDFNAPTAPSPTPTRELGNPIANGLPIEAPPSYDVAVSVP---VAPAVSAPAIA 62
            ||.|.|         ||..|                  :|||:|..|...|   :.|....|...
 Worm     1 MDSKGA---------APPYP------------------QAPPAYAEAQQPPPTIIYPPTQMPQQG 38

  Fly    63 PARPPPVVVVEQPAPQPPTVVPTDTLHLGPNRS--RVLCPACGANKTTRMTHTAN--SRTHMVAG 123
            |.: .||.||:|  ||...:|.|   .:.|:..  ...||.|..|..||:..|..  |.|.:..|
 Worm    39 PGQ-GPVYVVQQ--PQEIIIVGT---KMAPSFEPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLG 97

  Fly   124 LLCLVGFCCCACFVPYCMNSCRTGNHYCRKCNTFL 158
            |.......||     :|::..:...|.|..|.|.|
 Worm    98 LFVFFPLLCC-----FCLDGFKDSRHSCPNCGTIL 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13516NP_001033966.1 zf-LITAF-like 96..162 CDD:287559 19/65 (29%)
Y37D8A.6NP_499672.1 LITAF 66..132 CDD:197841 19/67 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158633
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.910

Return to query results.
Submit another query.