DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr13 and igsf9bb

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:373 Identity:76/373 - (20%)
Similarity:129/373 - (34%) Gaps:87/373 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FIIAYIAACGICDHTASASPGGGKTVAATMTTPASE------PSVRHIN-QNLIMSQSKEGEPVP 84
            ::...||:......||:....|.:.....:|:.|.|      ..|..:| |..::...|.|.|:|
Zfish     4 YVATLIASVFSTRGTAAQGAHGVREEPQFVTSRAGETVILGCDVVHPLNGQPYVVEWFKFGVPIP 68

  Fly    85 -----------VPQPYAQSAASAGGSSITSFDSTNVIDGQSQPTPTHLQEAVLQTHSHSRIQAKD 138
                       |...||..|:..|.||:..                            .|::::|
Zfish    69 FFINFRFYPPHVDPEYAGRASLHGKSSLRI----------------------------ERVRSED 105

  Fly   139 TAGPYPIPVHRPEPVENHLEANNGIEGGMESLFGTPMYFGTENSTVVTTQIGATAHVPCTVHHIG 203
             .|.|...|...|  :.:...:||  ..:......|..|.......|..:.|.:..:.||.....
Zfish   106 -QGWYECKVLMLE--QQYHTFHNG--SWVHLTVNAPPTFTDTPPQYVEAKEGGSITLSCTAFGNP 165

  Fly   204 EGVVSWIRKKDYHLLTVGLTTYSSDERFSATHLKHSEDWTLQIKFVQLRDAGVYECQVSTHPPTS 268
            :..|||:|:        |.....|      |..|.| |.:|.:..:...|.|.|.|:..:....:
Zfish   166 KPSVSWLRE--------GNPVQDS------TKYKVS-DGSLTLVSISREDRGAYTCRAYSEQGEA 215

  Fly   269 IFLHLSVVEARAEITGPPIRYLTPGS-TLRLQCRVVQNTEASEY-------IFWYHDNRMINYDI 325
            :  |.:    |..:.|||.....|.: |:.:........:|..|       .||..||.....|:
Zfish   216 V--HTT----RLLVQGPPFIVSPPENITVNISQDAFFTCQAEAYPGNLTYTWFWEEDNVFFKNDL 274

  Fly   326 DRGINVSTEPDFQSSELTIQRTRREHSGNFTCVASNT--QPASVLVHI 371
            .|.:::..:     ..|.|.:.:.|.:|.:||..||:  :|.|...::
Zfish   275 KRRVSILID-----GSLIISQVKPEDAGKYTCSPSNSLGRPPSASAYL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 20/95 (21%)
IG_like 182..262 CDD:214653 19/79 (24%)
IG_like 285..362 CDD:214653 19/84 (23%)
IGc2 292..361 CDD:197706 16/76 (21%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 21/111 (19%)
Ig 41..113 CDD:143165 18/100 (18%)
IG_like 144..223 CDD:214653 21/99 (21%)
IGc2 151..208 CDD:197706 18/71 (25%)
I-set 227..319 CDD:254352 21/96 (22%)
Ig <263..319 CDD:299845 15/60 (25%)
Ig_2 326..414 CDD:290606
IG_like 329..403 CDD:214653
IG_like 424..504 CDD:214653
Ig 440..504 CDD:299845
FN3 509..604 CDD:238020
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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