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Protein Alignment dpr13 and lrit3a

DIOPT Version :9

Sequence 1:	NP_001033956.2	Gene:	dpr13 / 3885598	FlyBaseID:	FBgn0034286	Length:	419	Species:	Drosophila melanogaster
Sequence 2:	NP_001122166.1	Gene:	lrit3a / 558559	ZFINID:	ZDB-GENE-080723-63	Length:	636	Species:	Danio rerio

Alignment Length:	380	Identity:	70/380 - (18%)
Similarity:	130/380 - (34%)	Gaps:	105/380 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    63 PSVR--HINQNLIMSQSKEGEPVPVPQPYAQSAASAGGSSITSFDSTNVID-----GQSQPTPTH 120
            ||::  .::.|.:.|...|..|..:...|...::    :.:|:..| :::|     ...||:...
Zfish   129 PSLKTLDLHNNRLTSVPVEAAPYLINITYLDISS----NKLTTLPS-DLVDIWPPFSGIQPSANT 188

  Fly   121 LQEAVLQTHSH---------SRIQAKDTAGPYPIPVHRPEPVENHLEANNGIEGGMESLFGTPMY 176
            .|:.||....:         ..|:....||   |||...:.|   |..:     |.|.|.|. ::
Zfish   189 SQKTVLGLQDNPWYCDCRISKLIELSKMAG---IPVVLMDQV---LTCS-----GPEHLSGV-LF 241

  Fly   177 FGTE-----------NSTVVTTQIGATAHVPCTVHHIGEGVVSWIRKKDYHLLTVGLTTYSSDER 230
            ...|           ::|.:|:.:|:...:.|..:......:.|              |.:....
Zfish   242 QRAELDQCVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLW--------------TTADGSV 292

  Fly   231 FSATHLKHSED----WT-LQIKFVQLRDAGVYECQV-STHPPTSIFLHLSVVEARAEITGPPIRY 289
            .:.|.::.|..    |: |.:..:..:|||.|.|:. :.......::.|||...:.....|||..
Zfish   293 VNNTVVQESPGEGVRWSILSLHSIVFKDAGDYRCKAKNVAGNAEAYITLSVDGVQPTTPFPPINI 357

  Fly   290 L-----TPGSTLRLQCRVVQNTEASEYIFWYHDNRMINYDIDRGINVSTEPDFQS-SELTIQRTR 348
            .     .|.:|                   :...:|..:.....|.::|.|...: ..||.:::.
Zfish   358 TKQPEDQPTTT-------------------FTPTKMPLFTSLSPITITTRPVMTTMPPLTTRKSP 403

  Fly   349 REHSGNFTCVASNTQPASVLVHIFKGDNPAAMYHGHVG-GSTKTTQSQLHMIMII 402
            ....|     ...:.||        ||.||.:.....| ||.|  :|.:..|.::
Zfish   404 IPGGG-----VQRSPPA--------GDKPAKVQQSKNGKGSIK--KSDIRDIEVV 443

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.