DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr13 and igsf9a

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_005155702.1 Gene:igsf9a / 557459 ZFINID:ZDB-GENE-060503-288 Length:1619 Species:Danio rerio


Alignment Length:343 Identity:78/343 - (22%)
Similarity:112/343 - (32%) Gaps:89/343 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TPASEPSVRHINQNLIMSQSKEGEPVPVPQPYAQSAASAGGSSITSFDSTNVID--GQSQPTPTH 120
            |.|:|..||      ....|....|..:|.|...|:|           |..||:  .|...||..
Zfish    22 TSAAEEHVR------AKKDSSAVLPCSLPAPQKDSSA-----------SQYVIEWVRQGFDTPIF 69

  Fly   121 LQEAVLQTHSHSRI---------------------QAKDTAGPYPIPVHRPEPVENHLEANNGIE 164
            :|..|     |.|:                     |.:| .|.|..   |..|::...| ..|..
Zfish    70 MQLGV-----HPRVHPDYDGRVSLFGGTSLQMSGLQLED-EGWYEC---RILPLDQTTE-EAGSS 124

  Fly   165 GGMESLFGTPMYFGTENS-TVVTTQIGATAHVPCTVHHIGEGVVSWIRKKDYHLLTVGLTTYSSD 228
            |....|..|.....||.| ..|...:|.:..:.|.........::|  .||             .
Zfish   125 GSWTRLSVTAPPVLTETSPPEVEVFVGRSLTLKCAAQGNPRPTITW--SKD-------------G 174

  Fly   229 ERFSATHLKHSEDWTLQIKFVQLRDAGVYECQVSTHPPTSIFLHLSVVEARAEITGPPIRYLTPG 293
            ......|.....:.::....|....||.|:|..|.....:  .|::    |.:|.|||:..:.|.
Zfish   175 APIKPQHKVKMVNGSVSFHAVSREAAGQYQCYTSNSEGNA--THVT----RLKIIGPPVIIIPPS 233

  Fly   294 STL-------RLQCRVVQNTEASEYIFWYHDNRMINYDID---RGINVSTEPDFQSSELTIQRTR 348
            .|:       :|:|:...:.....|: |......| |.||   ..|.|..:     ..|.|.|..
Zfish   234 DTVLNMSQDAKLKCQAEADPPNMTYV-WQRQGVDI-YHIDSLKSRIKVIVD-----GTLLISRLA 291

  Fly   349 REHSGNFTCVASNTQPAS 366
            .|.|||:||:.:|..|.|
Zfish   292 PEDSGNYTCMPTNGLPVS 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 16/96 (17%)
IG_like 182..262 CDD:214653 13/80 (16%)
IG_like 285..362 CDD:214653 23/86 (27%)
IGc2 292..361 CDD:197706 21/78 (27%)
igsf9aXP_005155702.1 IG_like 27..110 CDD:214653 22/108 (20%)
Ig 35..111 CDD:299845 20/95 (21%)
I-set 140..221 CDD:254352 17/101 (17%)
IGc2 151..212 CDD:197706 12/75 (16%)
Ig 233..318 CDD:299845 23/84 (27%)
I-set 233..318 CDD:254352 23/84 (27%)
Ig <349..402 CDD:299845
IG_like 423..502 CDD:214653
Ig 435..498 CDD:143165
FN3 507..602 CDD:238020
fn3 614..696 CDD:278470
PHA02666 1105..>1312 CDD:222914
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.