DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr13 and negr1

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:348 Identity:76/348 - (21%)
Similarity:124/348 - (35%) Gaps:134/348 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 GTPMYFGTENSTVVTTQIGATAHVPCTVHHIGEGVV--SWIRKKDYHLLTVGLTTYSSDERFS-A 233
            |..:.:.|.:.:||:.| |.||.:.|   ::.:|:.  :|:.:..  ::..|...:|.|.|.| .
Zfish    35 GQTVDYTTSSESVVSRQ-GDTALLRC---YLLDGISKGAWLNRSS--IIYAGNDKWSGDPRVSIV 93

  Fly   234 THLKHSEDWTLQIKFVQLRDAGVYECQVST----HP---------PTSIF--------------- 270
            :::....:::|||:.|.:.|.|||.|.:.:    ||         |..|:               
Zfish    94 SNVGDKHEYSLQIQKVDVTDEGVYTCSIQSERNLHPKLIQLIVKVPPKIYDISSDITVNEGSNVS 158

  Fly   271 ---------------LHLSVVEARAE------ITG------------------------------ 284
                           .|:|....:.|      |||                              
Zfish   159 LICAASGKPEPKISWRHISPSARKYESGEYLNITGISRDQAGDYECGAENDIASPDTKTVRVTVN 223

  Fly   285 -PPIRY------LTPGSTLRLQCRVVQNTEASEYIFWYHDNRMINYDIDRGI---NVSTEPDFQS 339
             ||..:      :.||....|:|...  ...|....||...:.||  :.:||   |:|:.     
Zfish   224 FPPAIHEMKSHGVRPGQVALLRCEAA--AVPSPVFEWYKGEKRIN--MGQGIVINNLSSR----- 279

  Fly   340 SELTIQRTRREHSGNFTCVASN---TQPASVLVHIF-----------KGDNPAAMYHGHVGGSTK 390
            |.||::...::..||:||||.|   |..|||.::..           ...|| ||| |..||:. 
Zfish   280 SVLTVKNMTQDRYGNYTCVAVNRLGTANASVPLNPIIEPTTTSAVSSPASNP-AMY-GSTGGAE- 341

  Fly   391 TTQSQLHMIMIIIASGYRIFHTS 413
                      :::|..|.|...|
Zfish   342 ----------VLLACWYLILALS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 29/141 (21%)
IG_like 182..262 CDD:214653 23/82 (28%)
IG_like 285..362 CDD:214653 25/88 (28%)
IGc2 292..361 CDD:197706 22/71 (31%)
negr1XP_009300786.1 Ig 42..121 CDD:299845 24/84 (29%)
IG_like 44..136 CDD:214653 25/97 (26%)
I-set 140..222 CDD:254352 7/81 (9%)
IGc2 153..208 CDD:197706 6/54 (11%)
IG_like 236..312 CDD:214653 27/84 (32%)
IGc2 238..304 CDD:197706 23/74 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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