DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr13 and Lac

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster


Alignment Length:203 Identity:56/203 - (27%)
Similarity:85/203 - (41%) Gaps:46/203 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 IGATAHVPCTVHHIGEGVVSWIR-KKDYHLLTVGLTTYSSDERFSATHLKHSEDWTLQIKFVQLR 252
            ||.|....|:|.:..|..|.::: ..|...|:.|.|....|.|||..:..:|..:.||||.:|..
  Fly    42 IGGTVEFDCSVQYAKEYNVLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQET 106

  Fly   253 DAGVYECQV--STHPPTSIFLHLSVVEARAEITGPPI--------RYLTPGSTLRLQCRVVQNTE 307
            |||.|.|||  ||       :|....|.:..:..||:        ...:.||.::::|      .
  Fly   107 DAGTYTCQVVIST-------VHKVSAEVKLSV
RRPPVISDNSTQSVVASEGSEVQMEC------Y 158

  Fly   308 ASEY----IFWYHDNRMINYDIDRGINVSTE-PDFQSSELTIQRTRREHSGNFTCVASNTQPASV 367
            ||.|    |.|..:|..|         :.|: ..:..:.|.|:..::|..|.:.|||.|      
  Fly   159 ASGYPTPTITWRRENNAI---------LPTDSATYVGNTLRIKSVKKEDRGTYYCVADN------ 208

  Fly   368 LVHIFKGD 375
              .:.|||
  Fly   209 --GVSKGD 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 31/89 (35%)
IG_like 182..262 CDD:214653 28/75 (37%)
IG_like 285..362 CDD:214653 20/89 (22%)
IGc2 292..361 CDD:197706 18/73 (25%)
LacNP_523713.2 IG_like 36..131 CDD:214653 32/95 (34%)
FR1 37..50 CDD:409353 3/7 (43%)
Ig strand A' 37..42 CDD:409353 56/203 (28%)
Ig strand B 44..51 CDD:409353 1/6 (17%)
CDR1 51..59 CDD:409353 2/7 (29%)
Ig strand C 59..63 CDD:409353 1/3 (33%)
FR2 60..63 CDD:409353 1/2 (50%)
CDR2 67..81 CDD:409353 4/13 (31%)
Ig strand C' 68..72 CDD:409353 1/3 (33%)
Ig strand C' 79..81 CDD:409353 0/1 (0%)
FR3 84..115 CDD:409353 14/30 (47%)
Ig strand D 84..90 CDD:409353 3/5 (60%)
Ig strand E 94..102 CDD:409353 3/7 (43%)
Ig strand F 108..115 CDD:409353 4/6 (67%)
CDR3 116..124 CDD:409353 3/14 (21%)
FR4 124..130 CDD:409353 1/5 (20%)
Ig strand G 124..130 CDD:409353 1/5 (20%)
Ig_3 134..208 CDD:404760 20/88 (23%)
Ig strand B 153..157 CDD:409353 0/3 (0%)
Ig strand C 166..170 CDD:409353 1/3 (33%)
Ig strand E 187..191 CDD:409353 1/3 (33%)
Ig strand F 201..206 CDD:409353 1/4 (25%)
Ig strand G 215..218 CDD:409353 56/203 (28%)
Ig 227..318 CDD:416386
Ig strand C 256..260 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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