DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr13 and Jaml

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_038938277.1 Gene:Jaml / 315610 RGDID:1562572 Length:379 Species:Rattus norvegicus


Alignment Length:277 Identity:54/277 - (19%)
Similarity:101/277 - (36%) Gaps:70/277 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 TENSTVVTTQIGATAHVPCTVHHIGE---GVVSWIRKKDYHL-----------LTVGLTTYSSDE 229
            |.:|..:...:|.:|.:.|.|....|   ..|.|:..|..|.           |:|....:.:..
  Rat    27 TVSSLKLRVHVGESALMGCVVQSTEEKPVDKVDWVFSKGEHAENEYVLYYYSSLSVPTGRFQNRS 91

  Fly   230 RFSATHLKHSEDWTLQIKFVQLRDAGVYECQVSTHPPTSI---FLHLSVV-----EARAEITGPP 286
            |.....|::  |.:|.::.||..|.|:|.|::......|:   |:.|.|:     |.|..: |.|
  Rat    92 RLVGDLLRN--DGSLLLQDVQKADEGIYTCEIRLKNEGSVSKKFVLLHVLPEEPKELRVHV-GDP 153

  Fly   287 I------RYLTPGSTLRLQCRVVQNTEASEYIFWYHD---------------NRM-INYDIDRGI 329
            |      |........|:.........|.|.|...:|               ||: :..||.|  
  Rat   154 IQMGCFFRSTEERRVTRVNWMFSSGKHAQEEIVLSYDFNMHSGTFQGQGRFRNRVDLTGDISR-- 216

  Fly   330 NVSTEPDFQSSELTIQRTRREHSGNFTC---VASNTQPASVLVHIFKGDNPAAMYHGHVGGSTKT 391
                    ....:.:|..::...|.:||   :.......::::|:.:.::|.:     :..:|:|
  Rat   217 --------NDGSIMLQTVKKSDQGVYTCSIYLGKLESRKTIVLHVIQDESPRS-----ISTTTET 268

  Fly   392 TQSQL-----HMIMIII 403
            ...|.     :.::||:
  Rat   269 AGKQQGILDGNQLVIIV 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 25/112 (22%)
IG_like 182..262 CDD:214653 22/93 (24%)
IG_like 285..362 CDD:214653 17/101 (17%)
IGc2 292..361 CDD:197706 14/87 (16%)
JamlXP_038938277.1 V-set 33..139 CDD:400157 24/107 (22%)
FR2 58..69 CDD:409353 4/10 (40%)
CDR2 70..82 CDD:409353 1/11 (9%)
Ig strand C' 71..77 CDD:409353 0/5 (0%)
Ig strand C' 78..82 CDD:409353 1/3 (33%)
FR3 87..121 CDD:409353 10/35 (29%)
Ig strand D 90..96 CDD:409353 1/5 (20%)
Ig strand E 100..108 CDD:409353 2/9 (22%)
Ig strand F 115..122 CDD:409353 3/6 (50%)
V-set 141..253 CDD:400157 20/122 (16%)
Ig strand A' 144..150 CDD:409353 2/5 (40%)
Ig strand B 152..162 CDD:409353 2/9 (22%)
CDR1 162..169 CDD:409353 0/6 (0%)
Ig strand C 169..176 CDD:409353 1/6 (17%)
FR2 170..181 CDD:409353 1/10 (10%)
CDR2 182..196 CDD:409353 3/13 (23%)
Ig strand C' 183..189 CDD:409353 2/5 (40%)
Ig strand C' 191..196 CDD:409353 0/4 (0%)
FR3 204..238 CDD:409353 9/43 (21%)
Ig strand D 207..213 CDD:409353 1/5 (20%)
Ig strand E 217..225 CDD:409353 0/7 (0%)
Ig strand F 232..238 CDD:409353 3/5 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 48 1.000 Inparanoid score I5388
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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