DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr13 and Ncam2

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_981954.2 Gene:Ncam2 / 288280 RGDID:1303131 Length:837 Species:Rattus norvegicus


Alignment Length:231 Identity:55/231 - (23%)
Similarity:83/231 - (35%) Gaps:76/231 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 GATAHVPCTVHHIGEGVVSWIRKKDYHLLTVGLTTYSSDERFSATHLKHSEDWTLQIKFVQLRDA 254
            |..|.|.|.|.......|||:    ||...|   |...|.||:.  |.::   .|||..:...|.
  Rat   129 GEDAEVVCRVSSSPAPAVSWL----YHNEEV---TTIPDNRFAV--LANN---NLQILNINKSDE 181

  Fly   255 GVYECQVSTHPPTSIFLHLSVVEARAE--------ITGPPIRYLTP----------GSTLRLQCR 301
            |:|.|:             ..||||.|        |...|...:.|          |..:.|.|:
  Rat   182 GIYRCE-------------GR
VEARGEIDFRDIIVIVNVPPAIVMPQKSFNATAERGEEMTLTCK 233

  Fly   302 VVQNTEASEYIFWYHDNRMINYD---IDRGINVSTEPDFQSSELTIQRTRREHSGNFTCVASN-- 361
            ...:.:.:  |.|:.:.::|..:   |.:|.|         :|||::....:..|::.|.|:|  
  Rat   234 ASGSPDPA--ISWFRNGKLIEENEKYILKGSN---------TELTVRNIINKDGGSYVCKATNKA 287

  Fly   362 ------------TQPASVLVHIFKGDNPAAMYHGHV 385
                        .||     ||.:..|.....:|||
  Rat   288 GEDQKQAFLQVFVQP-----HILQLKNETTSENGHV 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 23/85 (27%)
IG_like 182..262 CDD:214653 23/71 (32%)
IG_like 285..362 CDD:214653 18/103 (17%)
IGc2 292..361 CDD:197706 16/81 (20%)
Ncam2NP_981954.2 IgI_1_NCAM-2 21..113 CDD:409452
Ig strand B 38..42 CDD:409452
Ig strand C 50..54 CDD:409452
Ig strand E 76..80 CDD:409452
Ig strand F 90..95 CDD:409452
Ig strand G 104..107 CDD:409452
IGc2 128..189 CDD:197706 23/84 (27%)
Ig strand B 130..139 CDD:409353 3/8 (38%)
Ig strand C 145..153 CDD:409353 5/11 (45%)
Ig strand C' 156..159 CDD:409353 1/2 (50%)
Ig strand D 162..167 CDD:409353 2/6 (33%)
Ig strand E 168..175 CDD:409353 3/9 (33%)
IgI_1_MuSK 209..298 CDD:409562 17/99 (17%)
Ig strand B 228..232 CDD:409562 1/3 (33%)
Ig strand C 241..245 CDD:409562 1/5 (20%)
Ig strand E 264..268 CDD:409562 2/3 (67%)
Ig strand F 278..283 CDD:409562 1/4 (25%)
Ig strand G 291..294 CDD:409562 0/2 (0%)
Ig 300..397 CDD:416386 8/24 (33%)
Ig strand A 300..305 CDD:409353 3/9 (33%)
Ig strand A' 309..313 CDD:409353 1/3 (33%)
Ig strand B 317..325 CDD:409353 2/2 (100%)
Ig strand C 331..337 CDD:409353
Ig strand C' 340..343 CDD:409353
Ig strand D 353..359 CDD:409353
Ig strand E 362..368 CDD:409353
Ig strand F 376..384 CDD:409353
Ig strand G 387..397 CDD:409353
Ig_3 401..479 CDD:404760
Ig strand B 418..422 CDD:409353
Ig strand C 431..435 CDD:409353
Ig strand E 458..462 CDD:409353
Ig strand F 472..477 CDD:409353
Ig strand G 486..489 CDD:409353
FN3 496..588 CDD:238020
fn3 594..678 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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