DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr13 and Lrit1

DIOPT Version :9

Sequence 1:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_647547.2 Gene:Lrit1 / 246214 RGDID:628607 Length:623 Species:Rattus norvegicus


Alignment Length:211 Identity:52/211 - (24%)
Similarity:80/211 - (37%) Gaps:40/211 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 TVVTTQIGATAHVPCTVHHIGEGVVSWIRKKDYHLLTVGLTTYSSDERFSATHLKHSEDWT-LQI 246
            |.:.:.:|:|..:.|....|....:||.|.....|........|||          ...|| |.:
  Rat   261 TSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGTVHQEVSSD----------GSSWTLLDL 315

  Fly   247 KFVQLRDAGVYECQVSTH---PPTSIFLHLSVVEARAEITGPPIRYLTPGSTLRLQCRVVQNTEA 308
            ..|.|.|:|.|.||....   ..|.|.|.::..:...|.||      .||:   |..|..:..||
  Rat   316 PVVSLFDSGDYICQAKNFLGASETLISLIV
TEPQTSTEYTG------IPGA---LWARTGEGAEA 371

  Fly   309 SEYIFWYHDNRMINY---DIDRGINVSTEPDFQS--SELTIQRTRREHSGNFTCVASNTQPASVL 368
            :.|     :|:::..   .:...:.::|:|...|  .||.:|..:.:..|.|:...|..|... :
  Rat   372 AAY-----NNKLVARHVPHVPEPVALATKPSVPSIKEELPLQNFQMDVPGEFSREPSEHQETQ-M 430

  Fly   369 VHIFK--GDNPAAMYH 382
            |...|  ||.    ||
  Rat   431 VRSLKVVGDT----YH 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr13NP_001033956.2 V-set 180..276 CDD:284989 25/96 (26%)
IG_like 182..262 CDD:214653 22/79 (28%)
IG_like 285..362 CDD:214653 17/81 (21%)
IGc2 292..361 CDD:197706 16/73 (22%)
Lrit1NP_647547.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..128
LRR_8 131..>176 CDD:290566
LRR_4 131..172 CDD:289563
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..205 CDD:275378
TPKR_C2 201..>240 CDD:301599
Ig 257..345 CDD:299845 25/93 (27%)
IG_like 267..345 CDD:214653 24/87 (28%)
FN3 431..501 CDD:214495 6/16 (38%)
LRR 6 525..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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