DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and AT4G35820

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_195307.1 Gene:AT4G35820 / 829736 AraportID:AT4G35820 Length:272 Species:Arabidopsis thaliana


Alignment Length:125 Identity:30/125 - (24%)
Similarity:55/125 - (44%) Gaps:13/125 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ASSTKMKAYLDLDTRLKTQLRGY-SEDLQDHISTLNRYIDDRKS---ELDKVGKDPEVYLG-NPL 87
            :.||.:...|.|..||: .|:.| :.||..||:|.:..:.::.|   ::::..||..:... :||
plant     2 SKSTSVSTILYLRQRLQ-GLKIYETSDLIQHINTFDELVGEQVSVDVKIEEKTKDMILLCSLSPL 65

  Fly    88 ------NSFSLLHHLHFDWPAWRKLMEK-PLATEYITEIQEMWSEMPTKDEYTNSIKAAK 140
                  :...:...|.|....|.:::.| |.|..|...:...:....|.:|..:.|..||
plant    66 LTTLTCSMVKVAASLRFPNERWLEVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAK 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433 28/120 (23%)
P4Ha_N 260..391 CDD:462433
LapB <435..>505 CDD:442196
TPR repeat 452..491 CDD:276809
AT4G35820NP_195307.1 Retrotran_gag_2 <3..>64 CDD:464108 16/61 (26%)
PLN00052 76..>262 CDD:177683 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.

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