DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and p4ha2

DIOPT Version :9

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:377 Identity:69/377 - (18%)
Similarity:141/377 - (37%) Gaps:73/377 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 HQMEFIVMKSACILSVGLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLK 290
            |.:..|::...||..|            :.....|..::.:::..:.::::.|:.||...|.:|.
 Frog     4 HAISLILLSLCCIWEV------------QTEVFTSTGQMTDLIFRERDLLQSLKEYIREEEERLS 56

  Fly   291 TIDEALIDLATYHIQFERDKLAIASSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASLMSIKK 355
            .|.....::.....:...|.......||.:|.|:....:||:..:..:.:|..|..:|:....::
 Frog    57 KIKRWASEVDELSSRSTADPEGYLGHPVNAYKLVKRFNTDWSSLENLVLQDSAKGFIANFTFQRE 121

  Fly   356 YLPTKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLR 420
            |.||:.|.:.....:.::.:.|.:....||.|.:.|  |.||||                 :|..
 Frog   122 YFPTEEDETGAARALMRIQDTYKLDPDVIAKGKLPG--TNYISS-----------------LSAD 167

  Fly   421 DCVALSDHSMEMKDYNKSKEWLNVAISMLESSAYWDPIVPSADLYLKLAEVYVKQQNWTLALETV 485
            |...:...:....||..:..|:..|:..::...  |.:|...|:...|:....:..:...|||..
 Frog   168 DSFGMGKIAYHDGDYYHTVLWMQQALKQMDEGE--DAVVNKVDVLDYLSYTVFQLGDVPRALELT 230

  Fly   486 EFALKSNPRNAQLI-------RMQKRLSYHILLGPPKSPKLNIENN-----------DY------ 526
            :..|..:|.:.:.:       :||::....:    .::...|.|:.           ||      
 Frog   231 KRLLALDPNHDRAVNNLKYFEKMQEKQKAEL----KQNESTNTESATRQPGVYSRPLDYLPERDV 291

  Fly   527 ------------RLRKNGSLYCFYDTKIRTFYSLLAPIKAEVLFIDPLVILY 566
                        ..|:...|:|.|....|:.|.:|:|:|.|..:..|.::.|
 Frog   292 YEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVEDEWDSPRIVRY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:285528
P4Ha_N 260..389 CDD:285528 25/128 (20%)
TPR repeat 452..491 CDD:276809 8/38 (21%)
p4ha2XP_012814344.2 P4Ha_N 27..113 CDD:400573 15/85 (18%)
TPR repeat 166..201 CDD:276809 5/36 (14%)
TPR repeat 206..236 CDD:276809 6/29 (21%)
P4Hc 348..521 CDD:214780
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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