DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and CG15539

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001036776.1 Gene:CG15539 / 43627 FlyBaseID:FBgn0039782 Length:509 Species:Drosophila melanogaster


Alignment Length:352 Identity:84/352 - (23%)
Similarity:166/352 - (47%) Gaps:51/352 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 LSVGLIIVYL-----SYSNS---ENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEA 295
            |.:.|.|:||     |:|..   ||.:::|...:..::..:..::..|:.:..||:.::.|::  
  Fly     4 LLISLAILYLLVLVKSHSKPKILENNYAISIYDMSKLIDYEHYLLNILQKFANALQKRVDTLE-- 66

  Fly   296 LIDLATYHIQ---FERDKLAIASSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASLMSIKKYL 357
                  |:::   ::|:| .:|..|:..:.:...:.||:.:|..|::|.|....:..:::|...:
  Fly    67 ------YYLEMTDYDREK-NLAEDPIKHFRITRRLHSDYVNWVWFMEEQPWGTLVKDIIAIAPEM 124

  Fly   358 PTKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDC 422
            ||..|:.|...|:..:...|.:...::|.||:                  .:|..|..|..:: |
  Fly   125 PTLKDVEEAIRGLRLIQWTYSLPTAEMAKGVL------------------QDIHHNTSLDGMQ-C 170

  Fly   423 VALSDHSMEMKDYNKSKEWLNVAISMLESSAYWDPI-----VPSADLYLKLAEVYVKQQNWTLAL 482
            :.::.|.:..||:.::||||.|.:.|.|:....:.|     :|..|.|....|:..:..:..||:
  Fly   171 ITIARHMVNYKDFIRAKEWLMVGLKMYEADEEIEYIYSQLGMPLVDFYELFVEIQDELGSRYLAM 235

  Fly   483 ETVEFALKSNPRNAQLIRMQKRLSYHILLGPPKSPKLNIENNDYR------LRKNGSLYCFYDTK 541
            ..::.|:|:.|....|.|...||..:|.:|...:.|.|.....|:      .|....|||.|.| 
  Fly   236 SELQLAIKNWPEKVSLQRALSRLKMNIRIGKEPAEKKNKSKRVYKKCCSSECRPTAKLYCLYKT- 299

  Fly   542 IRTFYSLLAPIKAEVLFIDPLVILYHE 568
            ..:::..|||:|.|:|.:||.::|:|:
  Fly   300 TSSYFLRLAPLKMELLSLDPYMVLFHD 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 26/133 (20%)
LapB <435..>505 CDD:442196 19/74 (26%)
TPR repeat 452..491 CDD:276809 8/43 (19%)
CG15539NP_001036776.1 P4Ha_N 33..158 CDD:462433 26/151 (17%)
P4Hc 329..494 CDD:214780
Blue background indicates that the domain is not in the aligned region.

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