DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and CG18749

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster


Alignment Length:347 Identity:73/347 - (21%)
Similarity:165/347 - (47%) Gaps:49/347 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 QMEFIVMKSACILSV-GLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLK 290
            ::.||...|||.::. |.:     .||.:..::.|..:::.:|::::.:|..|:.|:..|:.|..
  Fly     6 KLTFIGFLSACFINCQGFV-----NSNPKKSYAASTMELMKLLEVEDELVDNLKGYVKTLKMKFN 65

  Fly   291 TIDEALIDLATYHIQFERDKLAIASSPVASYSLIHHMQSDWTHWQLFL----QEDPGKDELASLM 351
            .::.:|||::..:::.:.|..:...:|:.|:.|||.:.:.|..|..:.    ....|..|.|.||
  Fly    66 LMERSLIDMSRENMEMKSDYESYLGNPLNSFRLIHRLHTSWRKWYQYAIKVENNALGHIENARLM 130

  Fly   352 SIKKYLPTKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHL 416
              :|.|||.:|:.:.|.||..::..|.:..:::|.|.:.|    |......|             
  Fly   131 --RKMLPTSSDLQQACRGIHDLMYFYDLKPEELAAGNLAG----YSQPGTGL------------- 176

  Fly   417 MSLRDCVALSDHSMEMKDYNKSKEWLNVAISMLESSAYWDPIVPSADLYLKLAEVYVKQQNWTLA 481
             :..||:||.:..::.:..:.::.|.|::::.      :|.|:....::...|.:..|.:..|.|
  Fly   177 -TAYDCLALGEFGVQNQKDDLAEAWYNLSLTR------FDNIIEKYQVHKAWALLLAKNKQLTEA 234

  Fly   482 LETVEFALKSNPRNAQLIRMQKRLSYHILLGPPKSPKLNIENNDYRLRKNGSLYCFYDTKIRTFY 546
            .:..|    :.|..  ::...:.:.:..:|...::....::      :.:..|:|.|:|. .|.:
  Fly   235 FQHFE----NKPEG--IVASNEVIHFEGVLATTQNCTAVVQ------KPSKKLHCRYNTS-TTPF 286

  Fly   547 SLLAPIKAEVLFIDPLVILYHE 568
            :.:||:|.|.|.:||.::::|:
  Fly   287 TRIAPLKMEELGLDPYMVVFHD 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 34/134 (25%)
LapB <435..>505 CDD:442196 10/69 (14%)
TPR repeat 452..491 CDD:276809 7/38 (18%)
CG18749NP_001027154.1 P4Ha_N 35..168 CDD:462433 34/134 (25%)
P4Hc 314..468 CDD:214780
Blue background indicates that the domain is not in the aligned region.

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