DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and P4ha3

DIOPT Version :9

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_038938408.1 Gene:P4ha3 / 361612 RGDID:735150 Length:549 Species:Rattus norvegicus


Alignment Length:341 Identity:77/341 - (22%)
Similarity:139/341 - (40%) Gaps:56/341 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 SKVINILKIQENVVKYLENYIYALETKLKTIDEALIDLATYH---IQFERDKLAIASSPVASYSL 323
            :.|...|..:..::..|..|:...|.:|:       ||..::   :....|......:|:.:::|
  Rat    35 TSVARALAPERRLLGTLRRYLRGEEARLR-------DLTRFYDKVLSLHEDLKIPVVNPLLAFTL 92

  Fly   324 IHHMQSDWTHWQLFLQEDPGKDELASLM----SIKKYLPTKNDISEVCHGISKMLNAYLMTAQDI 384
            |..:||||.:....|:   ..:.:.:|.    .:::.||...|:......:.::.:.|::..:.:
  Rat    93 IKRLQSDWRNVVHSLE---ATENIRALKDGYEKVEQDLPAFEDLEGAARALMRLQDVYMLNVKGL 154

  Fly   385 ANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLR--DCVALSDHSMEMKDYNKSKEWLNVAIS 447
            |.||........|:          ::...|.|.||.  ||..:...:.:..||..:..||..|:|
  Rat   155 AQGVFQRVTGSSIT----------DLYSPRQLFSLTADDCFQVGKVAYDTGDYYHAIPWLEEAVS 209

  Fly   448 MLESS-AYW----DPIVPSADLYLKLAEVYVKQQNWTLALETVEFALKS--NPRNAQLIRMQKRL 505
            :...| ..|    :..:..|..||..|...|...:..|:|.. ||.:.|  |.|.|:.:...:||
  Rat   210 LFRRSYGEWKTEDEASLEDALDYLAFACYQVGNVSCALSLSR-EFLVYSPDNKRMARNVLKYERL 273

  Fly   506 ---SYHILLGPPKSPKLNIENNDYRLRKNG---------------SLYCFYDTKIRTFYSLLAPI 552
               :.|::.......:.|:.:...|....|               ||||.|:|. .:.|.||.|.
  Rat   274 LAENGHLMAAETAIQRPNVPHLQTRDTYEGLCQTLGSQPTHYQIPSLYCSYETN-SSPYLLLQPA 337

  Fly   553 KAEVLFIDPLVILYHE 568
            :.||:.:.|||.|||:
  Rat   338 RKEVIHLRPLVALYHD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:285528
P4Ha_N 260..389 CDD:285528 24/133 (18%)
TPR repeat 452..491 CDD:276809 11/43 (26%)
P4ha3XP_038938408.1 P4Ha_N 34..108 CDD:400573 16/79 (20%)
P4Hc 356..>478 CDD:214780
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343149
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

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