DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34041 and P4ha2

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_006532515.1 Gene:P4ha2 / 18452 MGIID:894286 Length:557 Species:Mus musculus


Alignment Length:369 Identity:71/369 - (19%)
Similarity:137/369 - (37%) Gaps:65/369 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 LSVGLIIVYLSY----SNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEALIDL 299
            |.|.::::.:|:    |..:.....|...:.:::..::::|:.|:.||...|.||..|......:
Mouse     3 LQVLVLVLLMSWFGVLSWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYILVEEAKLAKIKSWASKM 67

  Fly   300 ATYHIQFERDKLAIASSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASLMSIKKYLPTKNDIS 364
            .....:...|.....:.||.:|.|:..:.:||......:.:|.....:|:|...:::.||..|.|
Mouse    68 EALTSRSAADPEGYLAHPVNAYKLVKRLNTDWPALGDLVLQDASAGFVANLSVQRQFFPTDEDES 132

  Fly   365 EVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDCVALSDHS 429
            .....:.::.:.|.:....|:.|.:.|  |||                 :.::|:.||..|...:
Mouse   133 GAARALMRLQDTYKLDPDTISRGELPG--TKY-----------------QAMLSVDDCFGLGRSA 178

  Fly   430 MEMKDYNKSKEWLNVAISMLESSAYWDPIVPSADLYLKLAEVYVKQQNWTL-----ALETVEFAL 489
            ....||..:..|:...:..|::.       ..|.:...|...|:....:.|     |:|.....|
Mouse   179 YNEGDYYHTVLWMEQVLKQLDAG-------EEATVTKSLVLDYLSYAVFQLGDLHRAVELTRRLL 236

  Fly   490 KSNPRN----------AQLIRMQ--KRLSYHILLGPPKSPKLNIENNDY---------------- 526
            ..:|.:          .:|:..:  |.||.....|......|.....||                
Mouse   237 SLDPSHERAGGNLRYFERLLEEERGKSLSNQTDAGLATQENLYERPTDYLPERDVYESLCRGEGV 301

  Fly   527 RL--RKNGSLYCFYDTKIRTFYSLLAPIKAEVLFIDPLVILYHE 568
            :|  |:...|:|.|....|....|:||.|.|..:..|.::.|::
Mouse   302 KLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYD 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 26/130 (20%)
LapB <435..>505 CDD:442196 13/86 (15%)
TPR repeat 452..491 CDD:276809 7/43 (16%)
P4ha2XP_006532515.1 P4Ha_N 28..159 CDD:462433 26/130 (20%)
P4Hc 348..541 CDD:214780
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.