DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta3R and LOC797212

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_001337671.1 Gene:LOC797212 / 797212 -ID:- Length:353 Species:Danio rerio


Alignment Length:242 Identity:95/242 - (39%)
Similarity:138/242 - (57%) Gaps:27/242 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SSDSTFELLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVIIS 163
            |.||.||..:|    :.:.||.:|             |.|.::.|      ||..|:||.||:::
Zfish    11 SLDSDFEACAT----LRSFGSRVA-------------LYLFIITG------ILCTVVGNFLVVLA 52

  Fly   164 VQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASI 228
            :...::|:..||.||:|||:||.||.|..|.: :.|....|.|.|||..|::::||||...||||
Zfish    53 IAYFKQLQCPTNSFVMSLAVADFLVGLVVMPY-SMVRTVEGCWYFGPTFCHLHSSLDVMLCTASI 116

  Fly   229 LHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLH 293
            .||.||:.|||||:..||.|...|:.|.|..::...|.:|.||||.||..|.:....   :|.|.
Zfish   117 FHLSCIAFDRYYAVCNPLVYSFKMSRKRVGLLIVVCWAIPFLISFGPILFGLHKLGV---DIPLP 178

  Fly   294 PDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALS 340
            .:.|.|:||:.||:::|.|:|::|.:.|||.||:|:|.|.||...:|
Zfish   179 ENMCVFLVNRIYAVMASLVAFYLPMVTMLVAYWKIYKAAKRQAMQIS 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 83/195 (43%)
TM helix 1 142..167 CDD:320194 8/24 (33%)
TM helix 2 174..200 CDD:320194 13/25 (52%)
TM helix 3 213..243 CDD:320194 18/29 (62%)
TM helix 4 255..278 CDD:320194 10/22 (45%)
TM helix 5 302..331 CDD:320194 13/28 (46%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
LOC797212XP_001337671.1 7tmA_TAARs 29..321 CDD:320183 87/220 (40%)
TM helix 1 30..56 CDD:320183 11/44 (25%)
TM helix 2 63..89 CDD:320183 14/26 (54%)
TM helix 3 101..131 CDD:320183 18/29 (62%)
TM helix 4 143..166 CDD:320183 10/22 (45%)
TM helix 5 187..216 CDD:320183 13/28 (46%)
TM helix 6 250..280 CDD:320183
TM helix 7 289..314 CDD:320183
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.