DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and taar12j

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001076380.1 Gene:taar12j / 795139 ZFINID:ZDB-GENE-041014-59 Length:340 Species:Danio rerio


Alignment Length:245 Identity:77/245 - (31%)
Similarity:123/245 - (50%) Gaps:28/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 ITANGSDIAVDNQAELEESWLD-------LSLLLLKGFIFSSI-ILAAVLGNALVIISVQRNRKL 170
            :|:|.:|:..:|.........|       |:.|.:..:.|..: ||..|.||.|:|||:...::|
Zfish     1 MTSNDTDVHSENVLLCYPLLSDSCPRTQRLTALTVTMYAFMVLMILTTVFGNLLIIISISHFKQL 65

  Fly   171 RVITNYFVVSLAMADMLVALCAMTFN--ASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCC 233
            :..|:..|.|||.:|.|:....|.::  .|||   |.|..|..:|.|::|||:.||.:|::||..
Zfish    66 QSPTHLIVRSLAASDCLLGSLVMPYSMVRSVE---GCWYLGDVVCKVHSSLDMTFSISSLIHLSL 127

  Fly   234 ISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHP---- 294
            :|||||:||..||.|.:.:|:.||.......|:...:.||:.:|.|       :..|.|..    
Zfish   128 VSVDRYWAICDPLRYRMRVTNNTVIVFTVFTWLFSFVYSFSVVFSG-------VNRIGLETFIMQ 185

  Fly   295 ----DQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALS 340
                ..|....||.:.||.|.::|::|..:|..:|.:||..|.:..|.:|
Zfish   186 VYCVGSCVLFFNKQWGLICSLLTFFLPCTIMSSLYMKIFHVARKHAKVMS 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 68/206 (33%)
TM helix 1 142..167 CDD:320194 10/25 (40%)
TM helix 2 174..200 CDD:320194 9/27 (33%)
TM helix 3 213..243 CDD:320194 16/29 (55%)
TM helix 4 255..278 CDD:320194 5/22 (23%)
TM helix 5 302..331 CDD:320194 11/28 (39%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
taar12jNP_001076380.1 7tmA_TAAR2_3_4 35..320 CDD:320437 70/211 (33%)
TM helix 1 36..62 CDD:320437 10/25 (40%)
TM helix 2 69..95 CDD:320437 8/25 (32%)
TM helix 3 107..137 CDD:320437 16/29 (55%)
TM helix 4 149..172 CDD:320437 5/22 (23%)
TM helix 5 197..226 CDD:320437 11/28 (39%)
TM helix 6 249..279 CDD:320437
TM helix 7 288..313 CDD:320437
Blue background indicates that the domain is not in the aligned region.

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