DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Oamb

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:1126 Identity:205/1126 - (18%)
Similarity:322/1126 - (28%) Gaps:552/1126 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 NQAELEE-----SWLD----LSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVS 180
            |:.|.|:     .|.:    :||.:|:   |.::::  :.||.|||.:|..:.|||.:||:|:|:
  Fly     2 NETECEDLIKSVKWTEPANLISLAVLE---FINVLV--IGGNCLVIAAVFCSNKLRSVTNFFIVN 61

  Fly   181 LAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRP 245
            ||:||:||.|..:.|:|:.|:. ..|:||...|.::.::||:..|||||:||.||:|||.|:.||
  Fly    62 LAVADLLVGLAVLPFSATWEVF-KVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRP 125

  Fly   246 LEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALISS 310
            :.||..|:.|....::|.:|:|...|.|.|: :||                              
  Fly   126 VTYPSIMSTKKAKSLIAGIWVLSFFICFPPL-VGW------------------------------ 159

  Fly   311 SVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNAT 375
                                   :.:||:.                 |||     :|        
  Fly   160 -----------------------KDQKAVI-----------------QPT-----YP-------- 171

  Fly   376 SAREETHSALSNLEDMLQPATDEDDDRDECDELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHTD 440
               :..|:.                                                |...|.:.
  Fly   172 ---KGNHTL------------------------------------------------YYTTTMSS 185

  Fly   441 SAPSMMALQQQQPSHNQLQPPAPVFNPQIWTEGKMIPSKELDKEHSHPNGPQQQLSLTSGSGNSE 505
            |....:.|...:.......||:|   |.|                              |:||: 
  Fly   186 SEDGQLGLDSIKDQGEASLPPSP---PHI------------------------------GNGNA- 216

  Fly   506 PEPESTAYRVFGGLNSDESEGNDLYDTHLPLAEDNKELKRLIEDNYLYFKRQTGGTIISGPGGGK 570
                                    |:.:.|                       |...|.|....:
  Fly   217 ------------------------YNPYDP-----------------------GFAPIDGSAEIR 234

  Fly   571 YAALSETDFIRLKAGAAACGRKAFASSDSEFLRTISESRALPEQPVPGKEKGFNILSLLSKTKRS 635
            .||:..|                 ::|.:....|.:.|.:..|..:.        |.||:...::
  Fly   235 IAAIDST-----------------STSTTATTTTTASSSSTTETEMD--------LDLLNAPPQN 274

  Fly   636 STECFTLEKKRHQANSEGSSFFRRSRNRKLSHSYNGCGGGKERKLERRQRQHSDTDSTPNKPDIL 700
                                                             |..:.:.|.|.|.::.
  Fly   275 -------------------------------------------------RPQTISGSCPWKCELT 290

  Fly   701 LDIN-VLSEQSGASVIQQFSDGVQLIDFSELKTPPERIRSDDELAQLADCFGESPQQPATPPPSL 764
            .|.. ||....|:..|..|   |.|..:..:.....|                            
  Fly   291 NDRGYVLYSALGSFYIPMF---VMLFFYWRIYRAAVR---------------------------- 324

  Fly   765 SPPELPEPSGLLIASSSELAEIFRSLSFPLGRPAGAPQRLSTLSDQVCANYLMSPPNTPAPPAIS 829
                          ::..:.:.|::.....|..:...::..||                   .|.
  Fly   325 --------------TTRAINQGFKTTKGSKGIGSRFEEQRLTL-------------------RIH 356

  Fly   830 VPNGGAMDSSASSNAQSASINVYFLSPPPHAAAPGYTPSDTSTVSLDVVTSLPMPVPVPQPNPQM 894
            ...|.....|..||                    |.|.|.|:|:.                    
  Fly   357 RGRGSNQQDSMHSN--------------------GSTQSTTTTLG-------------------- 381

  Fly   895 ASQSNISPKPEIILDSTLSPVEGCGDEHRDVTSPLFKRKDSAG-DADVSVSGNGGAGGVGGVGGR 958
                  :|.||     .||........|.|      |.|.|.. .:..::|...|.|.||....:
  Fly   382 ------TPSPE-----RLSKYATRRLHHHD------KIKISVSYPSSENISELAGHGDVGHERRQ 429

  Fly   959 QGRCSILAGYDGIQTVRKRQASVVTYDVNVINFSQENSDSRSYIPMGRVSTSSAKHEFSNKSSLI 1023
            .|.......|:|..                                ||.||         :|.|.
  Fly   430 SGNALFAVHYNGTN--------------------------------GREST---------ESQLY 453

  Fly  1024 RRGGICIFVDEEEAEIIEQRPRGITFAAVPSPLPKCPLCGADISSTTGTTANATATANADSTIDT 1088
            |                :|:..|                                          
  Fly   454 R----------------QQQQHG------------------------------------------ 460

  Fly  1089 TVTTSSKRSIHEQTPDLGQRPASSSSSTRFWHKRTAAVTACWQQSKNRKRRFKTGCSHCGATGGS 1153
             |.:|....:.:..|:|.:|.:::|.:....|.|.|       ..|..:|..|.           
  Fly   461 -VASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPA-------NKKMGRRNIKA----------- 506

  Fly  1154 VRPAKGWKAEHKAARTLGIIMGVFLLCWLPFFLWYVITSLCGPACPCPD-VLVVVLFWIGYFNST 1217
              ..|.::.|.|||:||.||:|:|:.||.|||..|:|...|.   .|.| :|..||||:||.||.
  Fly   507 --QVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQ---DCVDPLLFSVLFWLGYCNSA 566

  Fly  1218 LNPLIYAYFNRDFREAFRNTL 1238
            :||:|||.|::|||.||:..:
  Fly   567 VNPMIYALFSKDFRFAFKRII 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 57/195 (29%)
TM helix 1 142..167 CDD:320194 7/24 (29%)
TM helix 2 174..200 CDD:320194 13/25 (52%)
TM helix 3 213..243 CDD:320194 16/29 (55%)
TM helix 4 255..278 CDD:320194 7/22 (32%)
TM helix 5 302..331 CDD:320194 0/28 (0%)
7tm_GPCRs <1161..1234 CDD:475119 38/73 (52%)
TM helix 6 1167..1189 CDD:410628 12/21 (57%)
TM helix 7 1202..1227 CDD:410628 15/25 (60%)
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 199/1101 (18%)
TM helix 1 22..48 CDD:320191 10/30 (33%)
TM helix 2 55..81 CDD:320191 13/25 (52%)
TM helix 3 93..123 CDD:320191 16/29 (55%)
TM helix 4 135..158 CDD:320191 7/23 (30%)
TM helix 5 292..321 CDD:320191 8/31 (26%)
TM helix 6 512..542 CDD:320191 16/29 (55%)
TM helix 7 551..576 CDD:320191 14/24 (58%)

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