DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Octbeta1R

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster


Alignment Length:347 Identity:176/347 - (50%)
Similarity:218/347 - (62%) Gaps:47/347 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ATSATNASHLQPATLTGHISTTAAAKTTTTP-TSSLPITSQFVDASLTSLSLTATSSDASYSSPF 94
            |.|||....:    |.|.||:....  |..| .|.:|:             |..::|.|.|....
  Fly     9 AMSATTTRTI----LEGSISSFGGG--TNEPLASKIPV-------------LEESASHARYLKFI 54

  Fly    95 SSYLSSDSTFELLSTVGPNITANGSDIAV-----------DNQAELEESWLD------LSLLLLK 142
            :..|..:.   |.|.||     :||.|||           |.||. |.|..|      |:|:.:|
  Fly    55 ADGLIDEG---LGSAVG-----SGSSIAVSVEDVVAGQAQDIQAS-EGSTDDADGSSHLALVFVK 110

  Fly   143 GFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWM 207
            .||...|||||:|||.|||:||.|:||||:||||||||||:||||||||||||||||.:| ||||
  Fly   111 CFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMIS-GKWM 174

  Fly   208 FGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALIS 272
            ||..||:::||.|||||||||:||||||||||||||:||:|||.||.:.|..||..||:.|||:|
  Fly   175 FGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLS 239

  Fly   273 FTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRK 337
            |.||..|||||.|:.:.:..:|..|.|.||||||::|||:||||||||||.||:||::||.||.:
  Fly   240 FLPICSGWYTTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQER 304

  Fly   338 ALSRTSSNILLNSVHMGHTQQP 359
            .:.|:....||...|:..:|.|
  Fly   305 LVYRSKVAALLLEKHLQISQIP 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 136/195 (70%)
TM helix 1 142..167 CDD:320194 16/24 (67%)
TM helix 2 174..200 CDD:320194 24/25 (96%)
TM helix 3 213..243 CDD:320194 24/29 (83%)
TM helix 4 255..278 CDD:320194 12/22 (55%)
TM helix 5 302..331 CDD:320194 22/28 (79%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 142/219 (65%)
TM helix 1 109..135 CDD:320194 16/25 (64%)
TM helix 2 142..168 CDD:320194 24/25 (96%)
TM helix 3 180..210 CDD:320194 24/29 (83%)
TM helix 4 222..245 CDD:320194 12/22 (55%)
TM helix 5 269..298 CDD:320194 22/28 (79%)
TM helix 6 343..373 CDD:320194
TM helix 7 383..408 CDD:320194
Blue background indicates that the domain is not in the aligned region.

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