DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and 5-HT2B

DIOPT Version :9

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster


Alignment Length:1242 Identity:258/1242 - (20%)
Similarity:401/1242 - (32%) Gaps:513/1242 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 STVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRV 172
            :|....|:|...|:..|    ....|..|:|:|         :|....||.||.:::...|:|:.
  Fly    55 ATGNATISATFEDVPFD----ANNYWALLALVL---------VLGTAAGNILVCLAIAWERRLQN 106

  Fly   173 ITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVD 237
            :||||::|||:.|::||:..|.... :.|..|.:..|...|..:..|||.|.||||:|||.||||
  Fly   107 VTNYFLMSLAITDLMVAVLVMPLGI-LTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVD 170

  Fly   238 RYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVN 302
            ||.::..|:.:..|.|.:.|...:..||:|...:|. |:.|.:  ::.|          .|.:||
  Fly   171 RYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSL-PLSLMY--SKNH----------ASVLVN 222

  Fly   303 -------KAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRK----------------------- 337
                   ..|.|:.|.|.|:||..|||:.|....:...|||:                       
  Fly   223 GTCQIPDPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQQTAAATPGWASGWLGQA 287

  Fly   338 -ALSR--TSSNIL------LNSVHMGHT--QQPTSLSYLHPSDCDLNATSAREETHSALS----- 386
             ||.|  |...:|      .:||...|:  ...|.||.|...:..|..:|.:|.|.:.::     
  Fly   288 PALERRCTWRRLLKPGPGNASSVLHAHSANSTDTDLSTLDNHELWLPDSSIKEPTPTTMTALHQF 352

  Fly   387 ---------NLEDMLQPATDEDDDRDECD-----ELRVPSPPPRRLSRSSIDLRDLEQERYEKVT 437
                     .||.:...:|.....:.|..     :|:.||.|                :|| ..|
  Fly   353 GAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSP----------------QRY-AAT 400

  Fly   438 HTDSAPSMMALQQQQPSHNQLQPPAPVFNPQIWTEGKMIPSKELDKEHSHPNGPQ-QQLSLTSGS 501
            |           ||...||..|.||.|::.|...:|:              :|.. ..||.|:..
  Fly   401 H-----------QQSHHHNHQQHPAGVYHQQASPKGR--------------HGTTVLGLSTTTLG 440

  Fly   502 GNSEPEPESTAYRVFGGLNSDESEGNDLYDTHLPLAEDNKELKRLIEDNYLYFKRQTGGTIISGP 566
            ...|....|.|....||   ::|:|.               |.:|.:....|.||:...:.:  |
  Fly   441 IERESTRNSLASSRMGG---EQSDGT---------------LSQLSQRLRAYKKRRRASSAV--P 485

  Fly   567 GGGKYAALSETDFIRLKAGAAACGRKAFASSDSEFLRTISESRALPEQPVPGKEKGFNILSLLSK 631
            |..|.|...:.|                  .|.|                               
  Fly   486 GREKRAGHEDAD------------------EDVE------------------------------- 501

  Fly   632 TKRSSTECFTLEK-KRHQANSEGSSFFRRSRNRKLSHSYNGCGGGKERKLERRQRQ------HSD 689
                 |...||.: |||.:..:.:.:   .|:..:..|.:.....:|...:::.:|      |||
  Fly   502 -----TPTSTLRRHKRHNSLPKNALY---PRHTTVQESLDDDDDEEEESAQQKDQQTKSKICHSD 558

  Fly   690 TDSTPNKPDILLDINVLSEQSGASVIQQFSDGVQLIDFSELKTPPERIRSDDELAQLADC--FGE 752
            |:..|  |......::..:...:..:|                          |..:..|  ||:
  Fly   559 TELDP--PQKAKQCHIAGQNHQSDYLQ--------------------------LPSVCTCPYFGD 595

  Fly   753 SPQQ------------------PATPPPSLSPPELPEPSGLLIASSSELAEIFRSLSFPL-GRPA 798
            .|.|                  ..|...|.||.|:.    ||:.||.....:..|:|..: |.||
  Fly   596 RPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEME----LLMCSSGNKKSLTSSVSAGITGGPA 656

  Fly   799 GAPQRLSTLSDQVCANYLMSPPNTPAPPAISVPNGGAMDSSASSNAQSASINVYFLSPPPHAAAP 863
            ||                       ||..:     |:..|..|::.|.:|:.|. .....:.|||
  Fly   657 GA-----------------------APATV-----GSTLSPHSAHNQGSSLTVQ-SDGSGYLAAP 692

  Fly   864 GYTPSDTSTVSLDVVTSLPMPVPVPQPNPQMASQSNISPKPEIILDSTLSPVEGCGDEHRDVTSP 928
            |                    .|.|                                        
  Fly   693 G--------------------TPCP---------------------------------------- 697

  Fly   929 LFKRKDSAGDADVSVSGNGGAGGVGGVGGRQGRCSILAGYDGIQTVRKRQASVVTYDVNVINFSQ 993
                    |...:|:|                                :.|||||:|        
  Fly   698 --------GRRKLSIS--------------------------------KTASVVTWD-------- 714

  Fly   994 ENSDSRSYIPMGRVSTSSAKHEFSNKSSLIRRGGICIFVDEEEAEIIEQRPRGITFAAVPSPLPK 1058
                             |::|                            |.||.:|..|.:.|..
  Fly   715 -----------------SSRH----------------------------RRRGSSFGGVRTSLLL 734

  Fly  1059 CPLCGADISSTTGTTANATATANADSTI----------------DTTVTTSSKRSIHEQTPDLGQ 1107
            .|       :.|.||:|::......:|:                .|..||||        |.:.|
  Fly   735 TP-------TKTATTSNSSTPLRRSATLRSHQNMNYQGAGECGGKTRTTTSS--------PCMLQ 784

  Fly  1108 RPASSSSSTRFWHKRTAAVTACWQQSKNRKRRFKTGCSHCGATGGSVRPAKGWKAEHKAARTLGI 1172
            |    ..:.|..|.|.::|.     |:|..|.           |..:|      .|.||.:.||:
  Fly   785 R----QQTVRSHHSRNSSVI-----SRNSSRH-----------GRIIR------LEQKATKVLGV 823

  Fly  1173 IMGVFLLCWLPFFLWYVITSLCGPACPCPDVL----VVVLFWIGYFNSTLNPLIYAYFNRDFREA 1233
            :...|::.|.|||:..::.::|   ..|.:.:    ..|:.|:||.:|.:||:.|..||:.||:|
  Fly   824 VFFTFVILWSPFFVLNLLPTVC---AECEERISHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQA 885

  Fly  1234 FRNTLEC 1240
            |:..|.|
  Fly   886 FKKVLLC 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tm_4 146..>346 CDD:304433 71/232 (31%)
7tm_1 156..>344 CDD:278431 70/220 (32%)
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 63/185 (34%)
7tm_4 90..>238 CDD:304433 54/161 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460675
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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