DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and 5-HT2A

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster


Alignment Length:1194 Identity:224/1194 - (18%)
Similarity:333/1194 - (27%) Gaps:581/1194 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TTTTPTSSLPITSQFVDASLTSLSLTATSSDASYSSPFSSYLSSDSTFELLSTVGPNITANGSDI 121
            |.|:....||        :||:|:.|:|:|.|..::.|:                          
  Fly   242 TNTSLDMFLP--------NLTALNTTSTASTADMATEFA-------------------------- 272

  Fly   122 AVDNQAELEESWLDLS-------LLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVV 179
                   :.:|:||.|       .|.:..|||     |..|||.||.::|..:|||:.:||||:.
  Fly   273 -------VTKSFLDYSPHGYDFLFLFVVFFIF-----AGGLGNILVCLAVALDRKLQNVTNYFLF 325

  Fly   180 SLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVR 244
            |||:||:||:|..|...| :....|.|..|...||:|.:.||...::||||:|.||:.||..|..
  Fly   326 SLAIADLLVSLFVMPMGA-IPAFLGYWPLGFTWCNIYVTCDVLACSSSILHMCFISLGRYMGIRN 389

  Fly   245 PLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALIS 309
            ||......|.:.....:|.||::..::|.:...||....:..:.|    |:.| .:.|:|:.:..
  Fly   390 PLGSRHRSTKRLTGIKIAIVWVMAMMVSSSITVLGLVNEKNIMPE----PNIC-VINNRAFFVFG 449

  Fly   310 SSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNA 374
            |.|:|:|| ::|:|..:.:....:|::                                     |
  Fly   450 SLVAFYIP-MLMMVTTYALTIPLLRKK-------------------------------------A 476

  Fly   375 TSAREETHSALSNLEDMLQPATDEDDDRDECDELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHT 439
            ..|.|...|.|.                             |||. ....||             
  Fly   477 RFAAEHPESELF-----------------------------RRLG-GRFTLR------------- 498

  Fly   440 DSAPSMMALQQQQPSHNQLQPPAPVFNPQIWTEGKMIPSKELDKEHSHPNGPQQQLSLTSGSGNS 504
                         |.|:|                     ::|....|......:.||:..|:.|.
  Fly   499 -------------PQHSQ---------------------QQLQMFSSFSGSNNKFLSMGDGNRNF 529

  Fly   505 EPEPESTAYRVFGGLNSDESEGNDLYDTHLPLAEDNKELKRLIEDNYLYFKRQTGGTIISGPGGG 569
            ..|.|...    ||..|..|   .:.....||.:......|.:  ..:.|:....||        
  Fly   530 NTEGEMEE----GGAPSRRS---GVEPAERPLMQQRTASSRSM--GTVSFRNVVNGT-------- 577

  Fly   570 KYAALSETDFIRLKAGAAACGRKAFASSDSEFLRTISESRALPEQPVPGKEKGFNILSLLSKTKR 634
                          :|||..||:...::.|.|                                 
  Fly   578 --------------SGAAGSGRRTTGTAHSSF--------------------------------- 595

  Fly   635 SSTECFTLEKKRHQANSEGSSFFRRSRNRKLSHSYNGCGGGKERKLERRQRQHSDTDSTPNKPDI 699
                           ...|:..||.|                                       
  Fly   596 ---------------RFSGAGIFRHS--------------------------------------- 606

  Fly   700 LLDINVLSEQSGASVIQQFSDGVQLIDFSELKTPPERIRSDDELAQLADCFGESPQQPATPPPSL 764
                                                                           |.
  Fly   607 ---------------------------------------------------------------SS 608

  Fly   765 SPPELPEPSGLLIASSSELAEIFRSLSFPLGRPAGAPQRLSTLSDQVCANYLMS--PPNTPAPPA 827
            ||           |||.......||.|| ..:..|.|    .|.|::..:..:|  ||:      
  Fly   609 SP-----------ASSCHSTSTSRSSSF-WRKHGGYP----NLMDRLAIHLRLSLVPPS------ 651

  Fly   828 ISVPNGGAMDSSASSNAQSASINVYFLSPPPHAAAPGYTPSDTSTVSLDVVTSLPMPVPVPQPNP 892
             |.||            :.||:.|                    |:|                .|
  Fly   652 -SHPN------------RRASVRV--------------------TIS----------------QP 667

  Fly   893 QMASQSNISPKPEIILDSTLSPVEGCGDEHRDVTSPLFKRKDSAGDADVSVSGNGGAGGVGGVGG 957
            |:...:|                                                    |||.||
  Fly   668 QLGYPTN----------------------------------------------------VGGNGG 680

  Fly   958 RQ-GRCSILAGYDGIQTVRKRQASVVTYDVNVINFSQENSDSRSYIPMGRVSTSSAKHEFSNKSS 1021
            |. |...:.||.:|...                               ||.|.||.         
  Fly   681 RTVGATEVGAGGNGSSA-------------------------------GRTSNSSL--------- 705

  Fly  1022 LIRRGGICIFVDEEEAEIIEQRPRGITFAAVPSPLPKCPLCGADISSTTGTTANATATANADSTI 1086
                ||..:.                                 .|::..|...|.:..|..:..:
  Fly   706 ----GGTSLM---------------------------------KIATIQGPILNQSQAAGGNHMV 733

  Fly  1087 DTTVTTSSKRSIHEQTPDLGQRPASSSSSTRFWHKRTAAVTACWQQSKNRKRRFKTGCSHCGATG 1151
            .....|:.|       |:..||  :.....:|...|.|..|...:...||.:|            
  Fly   734 QKVKPTALK-------PEEPQR--NKVRPFKFAFNRVATPTLNLRFLNNRSKR------------ 777

  Fly  1152 GSVRPAKGWKAEHKAARTLGIIMGVFLLCWLPFFLWYVITSLCGPACPCPDVLVVVLFWIGYFNS 1216
             :...|.....|.||.:.||::...|:|||.|||:..:|.:.| |.|..|:.:|....|:||.:|
  Fly   778 -NSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAAC-PECQVPEHVVNTCLWLGYVSS 840

  Fly  1217 TLNPLIYAYFNRDFREAFRNTLEC 1240
            |:||:||..|||.||.||...|:|
  Fly   841 TINPIIYTIFNRTFRAAFIRLLKC 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 67/195 (34%)
TM helix 1 142..167 CDD:320194 10/24 (42%)
TM helix 2 174..200 CDD:320194 14/25 (56%)
TM helix 3 213..243 CDD:320194 14/29 (48%)
TM helix 4 255..278 CDD:320194 4/22 (18%)
TM helix 5 302..331 CDD:320194 9/28 (32%)
7tm_GPCRs <1161..1234 CDD:475119 32/72 (44%)
TM helix 6 1167..1189 CDD:410628 9/21 (43%)
TM helix 7 1202..1227 CDD:410628 10/24 (42%)
5-HT2ANP_730859.1 7tm_GPCRs 298..>473 CDD:475119 63/181 (35%)
TM helix 2 321..343 CDD:410628 12/21 (57%)
TM helix 3 359..381 CDD:410628 10/21 (48%)
TM helix 4 404..420 CDD:410628 4/15 (27%)
TM helix 5 443..466 CDD:410628 8/23 (35%)
7tm_GPCRs <779..858 CDD:475119 33/79 (42%)
TM helix 6 792..814 CDD:410628 9/21 (43%)
TM helix 7 826..851 CDD:410628 10/24 (42%)

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