DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and HTR5A

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_076917.1 Gene:HTR5A / 3361 HGNCID:5300 Length:357 Species:Homo sapiens


Alignment Length:290 Identity:87/290 - (30%)
Similarity:132/290 - (45%) Gaps:68/290 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LPITSQFVDASLTSLSLTATS----------SDASYSSPFSSYLSSDSTFELLSTVGPNITANGS 119
            ||:       :|||.||:..|          .|...|||            |||..|        
Human     3 LPV-------NLTSFSLSTPSPLETNHSLGKDDLRPSSP------------LLSVFG-------- 40

  Fly   120 DIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMA 184
                            :.:|.|.||    ::.|....|.||:.::.|.|....:.:..|.|:|::
Human    41 ----------------VLILTLLGF----LVAATFAWNLLVLATILRVRTFHRVPHNLVASMAVS 85

  Fly   185 DMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYP 249
            |:|||...|..:...||||.:|..|..:|.::.:.||...||||.::..|::|||::|.|.:||.
Human    86 DVLVAALVMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHMEYT 150

  Fly   250 LNMTHKTVC-FMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALISSSVS 313
            |. |.|.|. .|:|..|.|.|:||..|:..||..|      .|...::|......:||:.|:..:
Human   151 LR-TRKCVSNVMIALTWALSAVISLAPLLFGWGET------YSEGSEECQVSREPSYAVFSTVGA 208

  Fly   314 FWIPGIVMLVMYWRIFKEA---IRQRKALS 340
            |::|..|:|.:||:|:|.|   :..||..|
Human   209 FYLPLCVVLFVYWKIYKAAKFRVGSRKTNS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 67/199 (34%)
TM helix 1 142..167 CDD:320194 6/24 (25%)
TM helix 2 174..200 CDD:320194 8/25 (32%)
TM helix 3 213..243 CDD:320194 11/29 (38%)
TM helix 4 255..278 CDD:320194 10/23 (43%)
TM helix 5 302..331 CDD:320194 10/28 (36%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
HTR5ANP_076917.1 7tmA_5-HT5 41..349 CDD:320451 71/209 (34%)
TM helix 1 42..68 CDD:320451 8/29 (28%)
TM helix 2 75..101 CDD:320451 8/25 (32%)
TM helix 3 114..144 CDD:320451 11/29 (38%)
TM helix 4 156..177 CDD:320451 8/20 (40%)
TM helix 5 197..226 CDD:320451 10/28 (36%)
TM helix 6 278..308 CDD:320451
TM helix 7 317..342 CDD:320451
Blue background indicates that the domain is not in the aligned region.

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