DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Hrh2

DIOPT Version :9

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_008769708.1 Gene:Hrh2 / 25461 RGDID:2831 Length:413 Species:Rattus norvegicus


Alignment Length:422 Identity:113/422 - (26%)
Similarity:171/422 - (40%) Gaps:102/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVE 200
            ::|.:....:.:::||..:.||.:|.::|..||:||.:||.|:||||..|:|:.|..:.|:|..:
  Rat    15 MALKVTISVVLTTLILITIAGNVVVCLAVSLNRRLRSLTNCFIVSLAATDLLLGLLVLPFSAIYQ 79

  Fly   201 LSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVW 265
            || .||.||...||:|.||||...|||||:|..||:|||.|:..||.||:.:|...|...|..:|
  Rat    80 LS-FKWSFGHVFCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYPVLVTPVRVAISLVFIW 143

  Fly   266 ILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFK 330
            ::...:||..|.|||  ...:.........:|...||:.|.|:...|:|::|.::|.|.|:||||
  Rat   144 VISITLSFLSIHLGW--NSRNGTRGGNDTFKCKVQVNEVYGLVDGLVTFYLPLLIMCVTYYRIFK 206

  Fly   331 EAIRQRKALSRTSS--------------------------------------------------- 344
            .|..|.|.::..||                                                   
  Rat   207 IAREQAKRINHISSWKAATIREHKATVTLAAVMGAFIICWFPYFTAFVYRGLRGDDAINEAVEGI 271

  Fly   345 -------NILLNSVHMGHTQQPTSLSYLHPSDCDLNATSAREETHSALSNLEDMLQPATDEDDDR 402
                   |..||.:......:....:|.....|..    |...:|.....|.:.|.|       |
  Rat   272 VLWLGYANSALNPILYAALNRDFRTAYQQLFHCKF----ASHNSHKTSLRLNNSLLP-------R 325

  Fly   403 DECDELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHTDSAPSMMALQQ----QQPSHNQLQPPAP 463
            .:..|.|.....|.:|...|          ..::||....|..:.|..    :|.|.:.|     
  Rat   326 SQSREGRWQEEKPLKLQVWS----------GTELTHPQGNPIRLCLSPGLSLRQASRHCL----- 375

  Fly   464 VFNPQIWTEGKMIPSKELD--------KEHSH 487
               |:.|.|.|..|:.:|.        :|.:|
  Rat   376 ---PRTWEEMKGPPTCQLSPLGKKTSPREQTH 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tm_4 146..>346 CDD:304433 81/257 (32%)
7tm_1 156..>344 CDD:278431 77/187 (41%)
Hrh2XP_008769708.1 7tm_4 29..302 CDD:304433 85/275 (31%)
7tm_1 35..287 CDD:278431 82/254 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H40613
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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