DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Drd4

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_006230583.1 Gene:Drd4 / 25432 RGDID:2522 Length:389 Species:Rattus norvegicus


Alignment Length:348 Identity:97/348 - (27%)
Similarity:157/348 - (45%) Gaps:64/348 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKL 170
            ||:..||.....|:.:......         :..|:.|.:...::||   ||:||.:||...|.|
  Rat    12 LLAGRGPESLGTGTGLGGAGAG---------AAALVGGVLLIGMVLA---GNSLVCVSVASERIL 64

  Fly   171 RVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCIS 235
            :..||||:||||.||:|:|:..:......|:.||.|:..|.:|:...::||...||||.:||.||
  Rat    65 QTPTNYFIVSLAAADLLLAVLVLPLFVYSEVQGGVWLLSPRLCDTLMAMDVMLCTASIFNLCAIS 129

  Fly   236 VDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREI-SLHPDQCSF 299
            |||:.|:..||.|  |...:....::|..|:|.|.:: .|:..|       |.:: ...|..|. 
  Rat   130 VDRFVAVTVPLRY--NQQGQCQLLLIAATWLLSAAVA-APVVCG-------LNDVPGRDPTVCC- 183

  Fly   300 VVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTSLSY 364
            :.::.|.:.||..||::|..:||::||..|: .:|:.:|...|..          |::.|...|.
  Rat   184 LEDRDYVVYSSICSFFLPCPLMLLLYWATFR-GLRRWEAARHTKL----------HSRAPRRPSG 237

  Fly   365 LHP-----------SDCDLNATSAREETHSALSNLEDMLQPATDEDDDRDECDE---------LR 409
            ..|           |||...:.|.|  |...:|:     :|  :.|..:..|..         .:
  Rat   238 PGPPVSDPTQGPLFSDCPPPSPSLR--TSPTVSS-----RP--ESDLSQSPCSPGCLLPDAALAQ 293

  Fly   410 VPSPPPRRLSRSSIDLRDLEQER 432
            .|:|..||...:.|..|:.:..|
  Rat   294 PPAPSSRRKRGAKITGRERKAMR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 68/196 (35%)
TM helix 1 142..167 CDD:320194 9/24 (38%)
TM helix 2 174..200 CDD:320194 12/25 (48%)
TM helix 3 213..243 CDD:320194 15/29 (52%)
TM helix 4 255..278 CDD:320194 5/22 (23%)
TM helix 5 302..331 CDD:320194 11/28 (39%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Drd4XP_006230583.1 7tm_GPCRs 44..381 CDD:475119 90/307 (29%)
TM helix 2 69..91 CDD:410628 11/21 (52%)
TM helix 3 108..130 CDD:410628 9/21 (43%)
TM helix 4 151..167 CDD:410628 4/16 (25%)
TM helix 5 187..210 CDD:410628 8/22 (36%)
TM helix 6 315..337 CDD:410628 1/2 (50%)
TM helix 7 349..374 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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