DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Chrm2

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_987076.2 Gene:Chrm2 / 243764 MGIID:88397 Length:466 Species:Mus musculus


Alignment Length:235 Identity:71/235 - (30%)
Similarity:123/235 - (52%) Gaps:26/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELS 202
            ::|:.|    |:.|..::||.||::|::.||.|:.:.|||:.|||.||:::.:.:|.......:.
Mouse    26 IVLVAG----SLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVI 86

  Fly   203 GGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWIL 267
             |.|..||.:|:::.:||...|.||:::|..||.|||:.:.:||.||:..|.|....|:|..|:|
Mouse    87 -GYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVL 150

  Fly   268 PALISFTPIFLGWY------TTEEHLREISLHPDQC--SFVVNKAYALISSSVSFWIPGIVMLVM 324
             :.|.:.|..|.|.      |.|:         .:|  .|..|.|....::..:|::|.|:|.|:
Mouse   151 -SFILWAPAILFWQFIVGVRTVED---------GECYIQFFSNAAVTFGTAIAAFYLPVIIMTVL 205

  Fly   325 YW---RIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTS 361
            ||   |..|..|::.|.....:.:.:..|:..|...:|.:
Mouse   206 YWHISRASKSRIKKEKKEPVANQDPVSPSLVQGRIVKPNN 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 66/206 (32%)
TM helix 1 142..167 CDD:320194 8/24 (33%)
TM helix 2 174..200 CDD:320194 9/25 (36%)
TM helix 3 213..243 CDD:320194 12/29 (41%)
TM helix 4 255..278 CDD:320194 7/22 (32%)
TM helix 5 302..331 CDD:320194 10/31 (32%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Chrm2NP_987076.2 7tmA_mAChR_M2 24..451 CDD:320424 71/235 (30%)
TM helix 1 25..51 CDD:320424 9/28 (32%)
TM helix 2 58..84 CDD:320424 9/25 (36%)
TM helix 3 96..126 CDD:320424 12/29 (41%)
Important for signaling 120..122 1/1 (100%)
TM helix 4 138..161 CDD:320424 7/23 (30%)
TM helix 5 183..212 CDD:320424 9/28 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..320 4/28 (14%)
TM helix 6 380..410 CDD:320424
TM helix 7 419..444 CDD:320424
Important for signaling 436..440
Blue background indicates that the domain is not in the aligned region.

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