DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and dop-3

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001024908.2 Gene:dop-3 / 188499 WormBaseID:WBGene00020506 Length:607 Species:Caenorhabditis elegans


Alignment Length:1135 Identity:212/1135 - (18%)
Similarity:321/1135 - (28%) Gaps:570/1135 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 ESWLDLSLLLLKGFIFSSII-LAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMT 194
            ||.|.:.|..:...:|..:: ..||.||.|||:||.|.|.|:.:||..:||||::|.:||:..|:
 Worm    12 ESPLMVVLWRVAAGVFLPLVPTMAVFGNVLVIMSVFRERSLQTVTNMLIVSLAVSDFMVAIGVMS 76

  Fly   195 FNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYP-------LNM 252
            |....|.:..||..|.|.|:||.:|||..||||||:|..||:|||.||..|:.|.       ..|
 Worm    77 FGVYYEWNDFKWGLGSFFCHVYQALDVACSTASILNLLAISLDRYIAIGHPISYAQYGARGGRAM 141

  Fly   253 THKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALISSSVSFWIP 317
            ...|:.:.::....||.|:...|:      .|..|:|..|        .|..:.:|||..||:||
 Worm   142 ISITIVWGVSVAVALPLLLGVNPM------EENDLQECEL--------ANPYFNMISSIFSFFIP 192

  Fly   318 GIVMLVMYWRIFKEAIRQRKAL-----SRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNATSA 377
            .|.|:::|..||:. :|||:..     ::.|.|..::|..:|                  .|..|
 Worm   193 CIAMIILYTIIFRR-LRQRERARSLRQAQRSENDKISSALLG------------------GAQIA 238

  Fly   378 REETHSALSNLEDMLQPATDEDDDRDECDELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHTDSA 442
            |:......:..:.:|                                        .|....|.|.
 Worm   239 RQMGKHFKNRTDQIL----------------------------------------LEISFQTSSF 263

  Fly   443 PSMMALQQQQPSHNQLQPPAPVFNPQIWTEGKMIPSKELDKEHSHPNGPQQQLSLTSGSGNSEPE 507
            |:|          ::....|...:|.|.:....:|.|                         .|.
 Worm   264 PTM----------SESSEDASTISPMINSFNNFLPKK-------------------------TPY 293

  Fly   508 PESTAYRVFGGLNSDESEGNDLYDTHLPLAEDNKELKRLIEDNYLYFKRQTGGTIISGPGGGKYA 572
            |                      .|.:|...:...:..|              |||         
 Worm   294 P----------------------STSIPAIPECGSMPNL--------------TII--------- 313

  Fly   573 ALSETDFIRLKAGAAACGRKAFASSDSEFLRTISESRALPEQPVPGKEKGFNILSLLSKTKRSST 637
                                                    |:|...|||..:|:.|         
 Worm   314 ----------------------------------------ERPEAEKEKEISIMDL--------- 329

  Fly   638 ECFTLEKKRHQANSEGSSFFRRSRNRKLSHSYNGCGGGKERKLERRQRQHSDTDSTPNKPDILLD 702
                                                              .||            
 Worm   330 --------------------------------------------------RDT------------ 332

  Fly   703 INVLSEQSGASVIQQFSDGVQLIDFSELKTPPERIRSDDELAQLADCFGESPQQPATPPPSLSPP 767
            :.:|.::..::::..|                          |.:..|||               
 Worm   333 VEMLDDKYSSAILTSF--------------------------QTSRSFGE--------------- 356

  Fly   768 ELPEPSGLLIASSSELAEIFRSLSFPLGRPAGAPQRLSTLSDQVCANYLMSPPNTPAPPAISVPN 832
                          ||.||   |.|                                        
 Worm   357 --------------ELEEI---LPF---------------------------------------- 364

  Fly   833 GGAMDSSASSNAQSASINVYFLSPPPHAAAPGYTPSDTSTVSLDVVTSLPMPVPVPQPNPQMASQ 897
               :|.|.|.......::.              |.|:|||..|                      
 Worm   365 ---IDGSNSVKHSREQLHT--------------TRSNTSTTRL---------------------- 390

  Fly   898 SNISPKPEIILDSTLSPVEGCGDEHRDVTSPLFKRKDSAGDADVSVSGNGGAGGVGGVGGRQGRC 962
              :..|||:                |.::.|                                  
 Worm   391 --LDVKPEL----------------RSISVP---------------------------------- 403

  Fly   963 SILAGYDGIQTVRKRQASVVTYDVNVINFSQENSDSRSYIPMGRVSTSSAKHEFSNKSSLIRRGG 1027
                   .||..:|     ::...|.:.||.:|.                    ::|..|:...|
 Worm   404 -------SIQDEKK-----LSQKSNDLPFSHQNG--------------------THKQKLLPNPG 436

  Fly  1028 ICIFVDEEEAEIIEQRPRGITFAAVPSPLPKCPLCGADISSTTGTTANATATANADSTIDTTVTT 1092
            |                                     :..:..||...|   |.....|:....
 Worm   437 I-------------------------------------LMKSKSTTLLKT---NGYMDTDSLNRN 461

  Fly  1093 SSKRSIHEQTPDLGQRPASSSSSTRFWHKR----TAAVTACWQQSKNRKRRFKTGCSHCGATGGS 1153
            |.|:|:.:.   |.....|.|.|.|.:..|    .:..|:.|.:.:..:...|            
 Worm   462 SHKKSLADL---LANDEFSFSDSMRVYKNRLFKSLSRATSGWNKPRPSRHMVK------------ 511

  Fly  1154 VRPAKGWKAEHKAARTLGIIMGVFLLCWLPFFLWYVITSLC-----GPACPCPDVLVVVLF---W 1210
             :..|..:.||||..||.:::.|||.||||||:.::..|:|     ..||    |..:.|:   |
 Worm   512 -KATKQMRREHKATVTLAVVLAVFLFCWLPFFVLHLSNSICLIIDENSAC----VGFLPLYLATW 571

  Fly  1211 IGYFNSTLNPLIYAYFNRDFREAFRNTLEC 1240
            :||.||:||||||..|::.||.||||.|.|
 Worm   572 LGYLNSSLNPLIYTVFDQRFRNAFRNILSC 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 77/203 (38%)
TM helix 1 142..167 CDD:320194 10/25 (40%)
TM helix 2 174..200 CDD:320194 11/25 (44%)
TM helix 3 213..243 CDD:320194 19/29 (66%)
TM helix 4 255..278 CDD:320194 5/22 (23%)
TM helix 5 302..331 CDD:320194 13/28 (46%)
7tm_GPCRs <1161..1234 CDD:475119 35/80 (44%)
TM helix 6 1167..1189 CDD:410628 11/21 (52%)
TM helix 7 1202..1227 CDD:410628 13/27 (48%)
dop-3NP_001024908.2 7tmA_D2-like_dopamine_R 22..>204 CDD:320181 72/195 (37%)
TM helix 1 23..49 CDD:320181 10/25 (40%)
TM helix 2 56..82 CDD:320181 11/25 (44%)
TM helix 3 95..125 CDD:320181 19/29 (66%)
TM helix 4 138..161 CDD:320181 5/22 (23%)
TM helix 5 177..204 CDD:320181 11/26 (42%)
7tm_GPCRs <515..595 CDD:475119 36/83 (43%)
TM helix 6 524..546 CDD:410628 11/21 (52%)
TM helix 7 563..588 CDD:410628 12/24 (50%)

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