Sequence 1: | NP_001034048.2 | Gene: | Octbeta3R / 3885573 | FlyBaseID: | FBgn0250910 | Length: | 1256 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510580.1 | Gene: | pcdr-1 / 181656 | WormBaseID: | WBGene00010329 | Length: | 318 | Species: | Caenorhabditis elegans |
Alignment Length: | 271 | Identity: | 60/271 - (22%) |
---|---|---|---|
Similarity: | 115/271 - (42%) | Gaps: | 43/271 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 133 W--LDLSLLLLKGFIFSSIILAAVL----GNALVIISVQRNRKLRVITNYFVVSLAMADMLVALC 191
Fly 192 AMTFNASVELSGGKWMFG---PFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMT 253
Fly 254 HKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVN----KAYALISSSVSF 314
Fly 315 WIPGIVMLV-MYWRIFKEAIRQRKALSRTSSNILL----NSVHMGHTQQPTSLSYL--------- 365
Fly 366 ---HPSDCDLN 373 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Octbeta3R | NP_001034048.2 | 7tm_4 | 146..>346 | CDD:304433 | 46/211 (22%) |
7tm_1 | 156..>344 | CDD:278431 | 40/195 (21%) | ||
pcdr-1 | NP_510580.1 | 7tm_classA_rhodopsin-like | 17..284 | CDD:381740 | 57/256 (22%) |
TM helix 1 | 17..41 | CDD:381740 | 7/23 (30%) | ||
TM helix 2 | 50..72 | CDD:381740 | 6/21 (29%) | ||
TM helix 3 | 91..113 | CDD:381740 | 2/21 (10%) | ||
TM helix 4 | 135..151 | CDD:381740 | 3/17 (18%) | ||
TM helix 5 | 175..198 | CDD:381740 | 4/23 (17%) | ||
TM helix 6 | 224..246 | CDD:381740 | 5/21 (24%) | ||
TM helix 7 | 259..284 | CDD:381740 | 0/1 (0%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |