DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Chrm4

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_031725.1 Gene:Chrm4 / 12672 MGIID:88399 Length:479 Species:Mus musculus


Alignment Length:368 Identity:94/368 - (25%)
Similarity:169/368 - (45%) Gaps:80/368 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 IFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFG 209
            :..|:.|..|:||.||::|::.||:|:.:.|||:.|||.||:::...:|.. .::.:..|.|..|
Mouse    37 VTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNL-YTLYIIKGYWPLG 100

  Fly   210 PFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFT 274
            ..:|:::.:||...|.||:::|..||.|||:.:.:||.||...|.|....|:|..|:| :.:.:.
Mouse   101 AVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWVL-SFVLWA 164

  Fly   275 PIFLGWYTTEEHLREISLHPDQC--SFVVNKAYALISSSVSFWIPGIVMLVMY--------WRIF 329
            |..|.|...   :.:.::..:||  .|:.|.|....::..:|::|.::|.|:|        .|:.
Mouse   165 PAILFWQFV---VGKRTVPDNQCFIQFLSNPAVTFGTAIAAFYLPVVIMTVLYIHISLASRSRVH 226

  Fly   330 K---EAIRQRKA--LSRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNATSAREETHSALSNLE 389
            |   |..:::||  |:...|.::..|:     ::|..            ..::|||..:  ..||
Mouse   227 KHRPEGPKEKKAKTLAFLKSPLMKPSI-----KKPPP------------GGASREELRN--GKLE 272

  Fly   390 DMLQPATDEDDDRDECDELRVPSPPPRRLS-------RSSIDLRDLEQERYEKVTHTDSAPSMMA 447
            :...||              :| ||||.::       .||.......:||......|..|.:..|
Mouse   273 EAPPPA--------------LP-PPPRPVADKDTSNESSSGSATQNTKERPPTELSTTEAATTPA 322

  Fly   448 LQQQQPSHNQLQPPAPVFNPQI------WTEGKMIPSKELDKE 484
            |            |||...|:.      |::.::: :|:...|
Mouse   323 L------------PAPTLQPRTLNPASKWSKIQIV-TKQTGSE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 61/205 (30%)
TM helix 1 142..167 CDD:320194 8/21 (38%)
TM helix 2 174..200 CDD:320194 9/25 (36%)
TM helix 3 213..243 CDD:320194 12/29 (41%)
TM helix 4 255..278 CDD:320194 6/22 (27%)
TM helix 5 302..331 CDD:320194 9/39 (23%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Chrm4NP_031725.1 7tmA_mAChR_M4 32..464 CDD:341344 94/368 (26%)
TM helix 1 33..59 CDD:341344 8/21 (38%)
TM helix 2 66..92 CDD:341344 9/26 (35%)
TM helix 3 104..134 CDD:341344 12/29 (41%)
TM helix 4 146..169 CDD:341344 6/23 (26%)
TM helix 5 191..220 CDD:341344 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..334 21/89 (24%)
TM helix 6 393..423 CDD:341344
TM helix 7 432..457 CDD:341344
Blue background indicates that the domain is not in the aligned region.

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