DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Adra1a

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_038489.2 Gene:Adra1a / 11549 MGIID:104773 Length:466 Species:Mus musculus


Alignment Length:265 Identity:86/265 - (32%)
Similarity:140/265 - (52%) Gaps:31/265 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LDLSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNAS 198
            :::|..:|.|.|...:|:..||||.|||:||..:|.|..:|:|::|:||:||:|:....:.|:|.
Mouse    21 VNISKAILLGVILGGLIIFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAI 85

  Fly   199 VELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLAN 263
            .|:. |.|.||...||::.::||...||||:.||.||:|||..:..||.||..:|.:.....|..
Mouse    86 FEIL-GYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGVRALLC 149

  Fly   264 VWILPALISFTPIFLGW---YTTEEHLREISLHPDQCSFVVNKAYALISSSVSFWIPGIVMLVMY 325
            ||.|..:||..|:| ||   ...:|.:.:|:..|         .|.|.|:..||::|..::||||
Mouse   150 VWALSLVISIGPLF-GWRQQAPEDETICQINEEP---------GYVLFSALGSFYVPLTIILVMY 204

  Fly   326 WRIFKEAIRQRKAL------SRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNATSAREETHSA 384
            .|::..|.|:.:.|      .::.|..:...:|..:.....|           ..:||:.:||.:
Mouse   205 CRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNVPAEGS-----------GVSSAKNKTHFS 258

  Fly   385 LSNLE 389
            :..|:
Mouse   259 VRLLK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 75/198 (38%)
TM helix 1 142..167 CDD:320194 12/24 (50%)
TM helix 2 174..200 CDD:320194 10/25 (40%)
TM helix 3 213..243 CDD:320194 15/29 (52%)
TM helix 4 255..278 CDD:320194 7/22 (32%)
TM helix 5 302..331 CDD:320194 11/28 (39%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Adra1aNP_038489.2 7tmA_alpha1A_AR 27..337 CDD:320448 85/259 (33%)
TM helix 1 28..54 CDD:320448 13/25 (52%)
TM helix 2 61..87 CDD:320448 10/25 (40%)
TM helix 3 99..129 CDD:320448 15/29 (52%)
TM helix 4 141..164 CDD:320448 8/23 (35%)
TM helix 5 181..210 CDD:320448 12/37 (32%)
TM helix 6 265..295 CDD:320448
TM helix 7 305..330 CDD:320448
Nuclear localization signal. /evidence=ECO:0000250 334..349
Blue background indicates that the domain is not in the aligned region.

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