DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and taar18g

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_021335132.2 Gene:taar18g / 100330560 ZFINID:ZDB-GENE-060413-11 Length:330 Species:Danio rerio


Alignment Length:245 Identity:67/245 - (27%)
Similarity:114/245 - (46%) Gaps:27/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 ELEESWLDLSLLLLKG----------FIFSSIILA-AVLGNALVIISVQRNRKLRVITNYFVVSL 181
            |.:..:.|::...:||          ::|.|::.| .|..|.|||||:...:||...||..::||
Zfish     9 ETQYCFPDINSSCVKGKRSRHEYNIMYVFFSLLSAWTVFLNLLVIISISHFKKLHTPTNMIILSL 73

  Fly   182 AMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPL 246
            |:.|:|:.|..|...| ::|....|.||...|.::..:.....:.|:.:|..|:||||.|:..||
Zfish    74 AVNDLLIGLIIMPLEA-IKLIETCWYFGETFCGLFMIIMGLLGSTSLSNLVLIAVDRYVAVCHPL 137

  Fly   247 EYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPD----QCSFVVNKAYAL 307
            .||..:|.......:...|:      |:..:...:.......:.|...|    .|:..::..|.:
Zfish   138 LYPQKITMSKTLVTICLCWL------FSSAYCSVFVVSNKYFDSSNRTDVCYGMCTLNLSFTYII 196

  Fly   308 ISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALS-----RTSSNILLNSVH 352
            :....||.:|.:||:.:|.|||..||:|.|.::     |..|::...|.|
Zfish   197 VDLIYSFLLPCVVMITVYLRIFYVAIKQVKVINFLMKGRRESSVKRKSEH 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 60/210 (29%)
TM helix 1 142..167 CDD:320194 12/35 (34%)
TM helix 2 174..200 CDD:320194 10/25 (40%)
TM helix 3 213..243 CDD:320194 9/29 (31%)
TM helix 4 255..278 CDD:320194 2/22 (9%)
TM helix 5 302..331 CDD:320194 10/28 (36%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
taar18gXP_021335132.2 7tmA_TAARs 32..308 CDD:320183 63/222 (28%)
TM helix 1 33..59 CDD:320183 10/25 (40%)
TM helix 2 66..92 CDD:320183 10/26 (38%)
TM helix 3 104..134 CDD:320183 9/29 (31%)
TM helix 4 146..169 CDD:320183 2/28 (7%)
TM helix 5 191..220 CDD:320183 10/28 (36%)
TM helix 6 243..273 CDD:320183 2/4 (50%)
TM helix 7 276..301 CDD:320183
Blue background indicates that the domain is not in the aligned region.

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