DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and adrb2

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001116897.2 Gene:adrb2 / 100144654 XenbaseID:XB-GENE-494302 Length:419 Species:Xenopus tropicalis


Alignment Length:310 Identity:108/310 - (34%)
Similarity:159/310 - (51%) Gaps:52/310 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SSPFSSYLSSDSTFE-LLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAV 154
            :||:     .:||.| |:|.|  :.|:|.||...|       :|     ::..|.|.|.|:|..|
 Frog     7 ASPY-----PNSTLEQLVSNV--SNTSNASDKPGD-------AW-----MVGMGIIMSCIVLVIV 52

  Fly   155 LGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSL 219
            |||.|||.::.:.::|:.:||||:.|||.||:|:.|..:.|.|| .:....|:|..|.|..:.|:
 Frog    53 LGNVLVITAIAKFQRLQTVTNYFITSLACADLLMGLIVVPFGAS-SIILDTWVFNNFWCEFWTSV 116

  Fly   220 DVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTE 284
            |:...||||..||.|:||||:||..|..|...:|......::..||::..|.||.||::.||..|
 Frog   117 DILCVTASIETLCVIAVDRYFAITSPFRYQSLLTKCKARIVILLVWVVSTLTSFLPIYMHWYRIE 181

  Fly   285 EHLREISLH----PDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSN 345
            |   |.:||    |..|.|..|.|||:.||.:||::|.:||:.:|.|:|:||.:|.|.:.::...
 Frog   182 E---ESALHCYDDPSCCFFFTNPAYAISSSIISFYLPLVVMIFVYARVFQEAKKQLKKIDKSEGR 243

  Fly   346 ILLNSVHMGHTQQPTSLSYLHPSDCDLNATSAREET-------HSALSNL 388
            .     |..:.||            |.|.....:.|       |.||..|
 Frog   244 F-----HNQNNQQ------------DTNGKQGNKRTSKFWLKEHKALKTL 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 83/199 (42%)
TM helix 1 142..167 CDD:320194 12/24 (50%)
TM helix 2 174..200 CDD:320194 14/25 (56%)
TM helix 3 213..243 CDD:320194 15/29 (52%)
TM helix 4 255..278 CDD:320194 7/22 (32%)
TM helix 5 302..331 CDD:320194 14/28 (50%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
adrb2NP_001116897.2 7tmA_Beta2_AR 38..337 CDD:341355 94/260 (36%)
TM helix 1 39..65 CDD:341355 12/25 (48%)
TM helix 2 72..99 CDD:341355 14/27 (52%)
TM helix 3 110..140 CDD:341355 15/29 (52%)
TM helix 4 152..175 CDD:341355 7/22 (32%)
TM helix 5 200..232 CDD:341355 16/31 (52%)
TM helix 6 267..297 CDD:341355 4/10 (40%)
TM helix 7 306..331 CDD:341355
Blue background indicates that the domain is not in the aligned region.

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