DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and taar13a

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001076571.1 Gene:taar13a / 100034639 ZFINID:ZDB-GENE-070424-256 Length:341 Species:Danio rerio


Alignment Length:205 Identity:65/205 - (31%)
Similarity:119/205 - (58%) Gaps:8/205 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 IFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFN--ASVELSGGKWM 207
            |.:|.:...:|||::||||:...::|:..||..|:|||:||:|:.|..|.|:  .||:   |.|.
Zfish    38 ILASAMTVTILGNSVVIISIAHFKQLQTPTNILVMSLALADLLLGLVVMPFSMIRSVD---GCWY 99

  Fly   208 FGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALIS 272
            :|...|.::::.|::.::.|||||.||:|||:.|:..||:||..:|......|:...|.|.|:.|
Zfish   100 YGETFCMLHSTFDLFLTSVSILHLVCIAVDRHQAVCYPLQYPTRITISVAWVMVMISWTLIAIYS 164

  Fly   273 FTPIF--LGWYTTEEHLREISLHPDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQ 335
            :..::  ......||::..|.. ...||.:.:|.::::.:.::|:.|..:|:.:|.|||..|.:.
Zfish   165 YGLVYSKANVEGLEEYIESIYC-MGHCSLLFSKLWSVLDTFITFFFPSCIMVGLYIRIFVVANKH 228

  Fly   336 RKALSRTSSN 345
            .:.::..:.|
Zfish   229 ARVITEANPN 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 64/196 (33%)
TM helix 1 142..167 CDD:320194 9/21 (43%)
TM helix 2 174..200 CDD:320194 13/27 (48%)
TM helix 3 213..243 CDD:320194 13/29 (45%)
TM helix 4 255..278 CDD:320194 5/24 (21%)
TM helix 5 302..331 CDD:320194 8/28 (29%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
taar13aNP_001076571.1 7tmA_TAARs 33..320 CDD:320183 65/205 (32%)
TM helix 1 34..60 CDD:320183 9/21 (43%)
TM helix 2 67..93 CDD:320183 12/25 (48%)
TM helix 3 105..135 CDD:320183 13/29 (45%)
TM helix 4 147..170 CDD:320183 5/22 (23%)
TM helix 5 195..224 CDD:320183 8/28 (29%)
TM helix 6 249..279 CDD:320183
TM helix 7 288..313 CDD:320183
Blue background indicates that the domain is not in the aligned region.

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