DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dyrk3 and prpf4b

DIOPT Version :9

Sequence 1:NP_001033810.1 Gene:Dyrk3 / 3885567 FlyBaseID:FBgn0027101 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_002936474.1 Gene:prpf4b / 779480 XenbaseID:XB-GENE-988306 Length:995 Species:Xenopus tropicalis


Alignment Length:531 Identity:134/531 - (25%)
Similarity:234/531 - (44%) Gaps:99/531 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 SKTKDVPGLFLRTISENSKSKSEPECESL--ISVKES--------------SVMENHTFLFHEQI 190
            |::||....|..::||..|.:.|...::|  ..|:|.              ::::.:.::..:..
 Frog   485 SRSKDKEDKFKGSLSEGMKIEQESSDDNLEDFDVEEEDEEALIEQRRQQRLAIVQKYRYINEDSN 549

  Fly   191 IMSGQQKCELHEKPKVLVVSPQQVMILYMNKLTPYERTEILTY---------------------- 233
            :....:........:....||..::......:..|||..|.|:                      
 Frog   550 MSVPSEPSSPQSSTRSRSPSPDDILERVAADVKEYERENIDTFEASVKAKQNLMTEQNNGAMQKK 614

  Fly   234 ---PQI----------YF---------IGANAKKRPGVYGPNNSEYDNEQGAYIHVPHDHVAYRY 276
               |.:          ||         ||.:.|:.|.:    ...:.:.:|.|.....:.:..||
 Frog   615 LLAPDMFTESDDMFAAYFDSARLRAAGIGKDFKENPNL----RDNWTDSEGYYRVNIGEILEKRY 675

  Fly   277 EMLKIIGKGSFGQVIKAYD-HKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIH 340
            .:....|:|.|..|::|.| .:.::.||:||:||.:...:...:|:..|..|...|..:..:.:.
 Frog   676 NVYGYTGQGVFSNVVRARDMARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLR 740

  Fly   341 MFDYFTFRNHTCITFELLSINLYELIKKNGFK-GFSLQLVRKFAHSLLQCLDALYKNDIIHCDMK 404
            :|.:|..:.|.|:.||.||:||.|::||.|.. |..::.||.::..|...|..|.:.:|:|.|:|
 Frog   741 LFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIK 805

  Fly   405 PENVLLKQQGRSGIKVIDFGS-SCFENQRIYTYIQSRFYRAPEVILGGKYGRAIDMWSLGCILAE 468
            |:|:|: .:.::.:|:.|||| |...:..|..|:.||||||||:|:|..|...|||||:||.|.|
 Frog   806 PDNILV-NESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKMYDYGIDMWSVGCTLYE 869

  Fly   469 LLSGHALFPGENESDQLACIIEVLG-MPNKNILASSKRSKSFFSPKGYPRY-------------- 518
            |.:|..||||:..:..|...:::.| ||||.|.....:.:.|.:...: .|              
 Frog   870 LYNGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDANLNF-MYIEVDKVTEREKVTV 933

  Fly   519 -CTVRTMSDGMVVLIGGQSRRGKQRGPPCSKSLSKALDGCKDPLFLNFIRGCLEWDADKRLTPSE 582
             .|:....|.:..|||.|.....||         |.:...||     .:...|..|..||::.::
 Frog   934 MSTINPTKDLLADLIGCQRLPEDQR---------KKVHQLKD-----LLDQILMLDPAKRISINQ 984

  Fly   583 ALKHPWLRRRL 593
            ||:||:::.::
 Frog   985 ALQHPFIQEKI 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dyrk3NP_001033810.1 PKc_DYRK2_3 211..589 CDD:271126 122/440 (28%)
S_TKc 276..589 CDD:214567 106/331 (32%)
prpf4bXP_002936474.1 PTZ00108 <104..327 CDD:240271
SF-CC1 225..>351 CDD:273721
STKc_PRP4 674..991 CDD:271037 107/332 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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