DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dyrk3 and prpf-4

DIOPT Version :9

Sequence 1:NP_001033810.1 Gene:Dyrk3 / 3885567 FlyBaseID:FBgn0027101 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_001250391.1 Gene:prpf-4 / 172443 WormBaseID:WBGene00004186 Length:775 Species:Caenorhabditis elegans


Alignment Length:569 Identity:154/569 - (27%)
Similarity:246/569 - (43%) Gaps:71/569 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QIQMINQNLTHTGIAQNNTEKANRHQYRDSGLQYLTRCFEPLAMLNDSKEDFPTQPSNNIANYPG 113
            :||:|.:...||   :.||.:.:.....|:              :.|.|.|.....|::..:...
 Worm   243 RIQIIKKIEGHT---EENTPRDSSTPRSDT--------------IGDKKTDESEDSSSDSEDDED 290

  Fly   114 DIQILPIFDCCEI----SESIQAISLPNVTSPSKTKDVPGLFLRTISENSKSKSEPECESLISVK 174
            |.::....|..:.    ||.....|.|  .|.....|.|..|...:.:......:.:..::..|.
 Worm   291 DRKLAEAKDLIKSTRFGSEQGSGASTP--VSIQSDNDTPTDFFSGLRDKMVHMKDADEHNVDEVL 353

  Fly   175 ESSVMENHTFLFHEQIIMSGQQKCELHEKPKVLVVSPQQVM--------------ILYMNKLTPY 225
            :....|.:...:|.|  :..|:|.|..||.|.|........              :...|:..|.
 Worm   354 QRGKDEEYREDWHTQ--LKEQEKREEEEKKKKLEAEAAAEAAKKKKQEEDDTGFDMFADNEELPQ 416

  Fly   226 ERTEILTYPQIYFIGANAKKRPGVYGPNNSEYDNEQGAYIHVPHDHVAYRYEMLKIIGKGSFGQV 290
            :.|.|..:.     ||       |:......:|:.:|.|.....:.:..||.::...|.|.||.|
 Worm   417 DSTTIDGHS-----GA-------VHDTLKDNWDDVEGYYRVRIGELLDTRYRVVGFTGAGVFGNV 469

  Fly   291 IKAYDHKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIHMFDYFTFRNHTCITF 355
            .:..|......||:||:||.:..::....|:.:|..|...||.:..:.:.:|..|...||.|:.|
 Worm   470 CRCNDQTKGNTVAVKIIRNNEVMYKTGLRELEVLRKLNEADKEDKYHCLRLFRTFKHHNHLCLVF 534

  Fly   356 ELLSINLYELIKKNGFK-GFSLQLVRKFAHSLLQCLDALYKNDIIHCDMKPENVLLKQQGRSGIK 419
            |.||:||.||:||.|.| |..|:.||.:|..||..|..|.|.:.:|.|:||:|:|: .:.:..:|
 Worm   535 ENLSMNLRELLKKYGQKDGLHLKAVRSYAQQLLLALRLLKKLEFVHADIKPDNILV-NESKLTLK 598

  Fly   420 VIDFGSSCFEN-QRIYTYIQSRFYRAPEVILGGKYGRAIDMWSLGCILAELLSGHALFPGENESD 483
            :.||||:...| |.:..|:.||||||||::||.::..|||:||:...|.|:.:|..:|||...:.
 Worm   599 LCDFGSAGRVNEQELAPYLVSRFYRAPEIMLGVRHDYAIDLWSVAVTLYEVYTGKIMFPGRTNNH 663

  Fly   484 QLACIIEVLG-MPNKNILASSKRSKSFFSPKGYPRYCTVR-------TMSDGMVVLIGGQSRRGK 540
            .|....:|.| .|||.:      .||.|....:...|.:.       |..:.:.||...:..|..
 Worm   664 MLKLFTDVKGKYPNKLV------RKSQFKDTHFDVNCNLLYQEVDKVTERNKITVLANLKPTRDL 722

  Fly   541 QRGPPCSKSLSK-ALDGCKDPLFLNFIRGCLEWDADKRLTPSEALKHPW 588
            :......:.||: .:|..:  .|...:.|.|..|..||.|.:||||||:
 Worm   723 ESELIAGQRLSRDQMDQIQ--AFRTLLDGMLILDPSKRTTCNEALKHPF 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dyrk3NP_001033810.1 PKc_DYRK2_3 211..589 CDD:271126 121/403 (30%)
S_TKc 276..589 CDD:214567 110/324 (34%)
prpf-4NP_001250391.1 STKc_PRP4 454..770 CDD:271037 111/325 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D870358at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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