DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment t-Grip84 and SPC98

DIOPT Version :10

Sequence 1:NP_648139.1 Gene:t-Grip84 / 38852 FlyBaseID:FBgn0035800 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_196286.1 Gene:SPC98 / 830557 AraportID:AT5G06680 Length:838 Species:Arabidopsis thaliana


Alignment Length:773 Identity:161/773 - (20%)
Similarity:285/773 - (36%) Gaps:172/773 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SVDEKMRPSGSENS--------GHNCNTSSSSSLPRQESWIFESVGGYFLANEN----------- 81
            |.|.|...:|.::|        |...|...|....:::.|    ..|..|.:::           
plant   113 SDDRKSAINGLDSSVLLPNLGIGDTGNGVLSRGEAKKKDW----SNGVLLVSKDPENLRDIAFRE 173

  Fly    82 ---LAKMSLPCQEQLLMRDLIYAFSGVPSAYVKPDIQIDQISEMSAVDI---AKIRFRLKKTFTG 140
               |.|......|::|:||::||..|:...|||.:.:||..:...:|.:   .:|..|:......
plant   174 YAILVKEENEVTEEVLVRDVLYASQGIDGKYVKFNSEIDGYAVQESVKVPRATRIMVRMLSELGW 238

  Fly   141 AFRALANETLPLIGYYISVQSYIEETN---MSPNCGRTRLTLATALSDQLQDYYDLQSKLETDL- 201
            .||              .|:::|.|:.   .:.:.|........||.|:|.|||.|.:.||... 
plant   239 LFR--------------KVKTFITESMDRFPAEDVGTVGQAFCAALQDELSDYYKLLAVLEAQAM 289

  Fly   202 -----------QDKKLDLKDLVRQVRPWL--PILK-----TFSNMASSARGNLTSAQVLTLLDQF 248
                       .:..|.|    |::..|.  |::|     ...:.....||...:..:       
plant   290 NPIPLVSESASSNNYLSL----RRLSVWFAEPMVKMRLMAVLVDKCKVLRGGAMAGAI------- 343

  Fly   249 YRDLKDTDIDLKERVNKILTSTSRAYMKIVQLWMQKGVLFDTQHEFFVEDTEPSSTMSSTLLAPE 313
            :...:..|..:.:.:..:|........::|:.|:.:|.|.||..||||    ....:...||   
plant   344 HLHAQHGDPLVHDFMMSLLRCVCSPLFEMVRSWVLEGELEDTFGEFFV----VGQPVKVDLL--- 401

  Fly   314 KCCHAYWAERYRLLPDRLPGFLL-SQADDIFLAGKYLNILRQC--------NVSLKLLQRPLAYS 369
                  |.|.|:|.|..||.|:. |.|..|...||.:|.||.|        ..|...........
plant   402 ------WREGYKLHPAMLPSFISPSLAQRILRTGKSINFLRVCCDDHGWADAASEAAAASGTTTR 460

  Fly   370 QGDLGHEE-------IIKTSYELPAHKFLKVLVEEHNLPLHIRNLKSYFLLQEEGFSETFLHKCH 427
            :|.||:.|       :.:.:..:..| .|.||.:.:....|...:|.|.||.:           .
plant   461 RGGLGYGETDALEHLVTEAAKRIDKH-LLDVLYKRYKFKEHCLAIKRYLLLGQ-----------G 513

  Fly   428 EYLKYNVERLIPEKLQTLLAETLHKSNDFIKDNVRCQLKVCDVATLLGRQHKAQRAVEDEEEEEK 492
            ::::|.::.:.|:     |:|..:..:.|            ::|..|....:|..|..| :.:..
plant   514 DFVQYLMDIVGPK-----LSEPANNISSF------------ELAGFLEAAIRASNAQYD-DRDML 560

  Fly   493 ESCSEQDPPEVLNLYGYEALALGYETKWPLSFIIYPELLEQLQMLQRVLFFLHYVKHHLTVLW-- 555
            :....:..|......|::..:|.||.:.||..:....:|.:...:...|:.|..|:|.|..:|  
plant   561 DRLRVKMMPHGSGDRGWDVFSLEYEARVPLDTVFTESVLSKYLRVFNFLWKLKRVEHALIGIWKT 625

  Fly   556 --------------QSPCEGTGLQLTNRSGKLRHRMLMCMLSLENHIIQDITEPRWQSLTLTVDK 606
                          ||..:...|....|...|.:.|...:.:.:.:|:.::.|..|.:.:..::.
plant   626 MKPNCITSNSFVKLQSSVKLQLLSALRRCQVLWNEMNHFVTNFQYYIMFEVLEVSWSNFSKEMEA 690

  Fly   607 AKCIDEVLNKLESTVEECLRLGLL-PTANTFVKSLYTLGHVCLNF---CDFVESSIGEKSTKELE 667
            ||.:|::|...|..:...:...|| ..:.|..:||:.|..:.|.|   .|.:...|.|...:..|
plant   691 AKDLDDLLAAHEKYLNAIVGKSLLGEQSQTIRESLFVLFELILRFRSHADRLYEGIHELQIRSKE 755

  Fly   668 QEVVEYEEEFKSFLTSILELVSQLAKTKDIAERDSCKQLLKRLGELIEFSDLDKDQIA 725
            ..    .|:.||     .|..|.:::.:        |.|.:|.||.::....|.|.||
plant   756 SG----REKNKS-----QEPGSWISEGR--------KGLTQRAGEFLQSMSQDMDSIA 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
t-Grip84NP_648139.1 GCP_N_terminal 96..397 CDD:465456 77/341 (23%)
GCP_C_terminal 400..710 CDD:461187 62/329 (19%)
SPC98NP_196286.1 GCP_N_terminal 190..493 CDD:465456 77/341 (23%)
GCP_C_terminal 499..831 CDD:461187 69/344 (20%)

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