DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmm and dync1i2a

DIOPT Version :10

Sequence 1:NP_648138.1 Gene:mmm / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001429003.1 Gene:dync1i2a / 767729 ZFINID:ZDB-GENE-060929-1086 Length:626 Species:Danio rerio


Alignment Length:660 Identity:122/660 - (18%)
Similarity:225/660 - (34%) Gaps:209/660 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 PPKIEREQQTNPTFPSNAWSQYLYEIDDEDLELDETDVDEEEEKKKAQAKPGTYVE-PEKK---- 335
            |.|:...:.|:..||......|..|.....:...:.:.|||||...||.:..|..| ||:|    
Zfish   126 PLKLAMTKMTHVDFPPKEVVSYTKETQTPTMTEQKDEEDEEEETPAAQPEAETEKEKPEEKQVEE 190

  Fly   336 --PPEMSAQIEM-LLNTLEFNQIDSYRDDYSLISSRQVVQYTNPYLQ-----------EFLCFAN 386
              |.|::.:.:: :|::.||  :|.: |..:.|..|.:.::.:.:..           |......
Zfish   191 ALPHELTEEEKLQILHSEEF--MDFF-DHSTRIVERALSEHVDVFFDYSGRDMEEKEGEMQAGTK 252

  Fly   387 ISKSNK---------RFVAGYDWYPKLSGLIAVSYAFSTPATVNEATNRVDYVQRAVLEPNPV-L 441
            :|.:.|         |.|...||.|:...|:..||           .|.    :.|..||:.| |
Zfish   253 LSLNRKFVDDRWSKQRVVTCLDWSPQYPELLVASY-----------NNN----EEAPHEPDGVAL 302

  Fly   442 LWSFSDNLNYK-----LEFEAPIETTALTFCPFNGDILLGGSKNGQVVLWDLQGRCEKLDEEEYL 501
            :|    |:.||     ..|.......:..|..|:.::::||:.:||:||||.:.......:...|
Zfish   303 VW----NMKYKKATPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNRRTPVQRTPL 363

  Fly   502 TAAQAKYRIMIGEFLNWTIDIEDNVIVPATISLLDCSPKGAITAFYWLGRSIYLSQFGKVYNDPD 566
            :||...:.:.                         |                        .|...
Zfish   364 SAAAHTHPVY-------------------------C------------------------VNVVG 379

  Fly   567 IRNHHKFFVTCAFDGTISFWDLDGKGGKSAKDKMRNRMLPKELTQSESAFKSMVIKPTYNLYFPE 631
            .:|.|. .::.:.||.:..|.||              ||.:.....|..||.             
Zfish   380 TQNAHN-LISISTDGKMCSWSLD--------------MLSQPQDSMELVFKQ------------- 416

  Fly   632 PITGIIADTSCLSCLTPVAKLIQANPSNYPIKTIAKDPPTMRQSMIVSTFYGHVSRIDWQGTYTE 696
                              :|.:.....::|:..:        .:.:|.:..|.|......|  :.
Zfish   417 ------------------SKSVAVTSMSFPLGDV--------NNFVVGSEDGSVYTASRHG--SR 453

  Fly   697 GEATEVINSSIPFAMVHDGPVVMV----KKNPF-YPELF--ASIGRTILAIWKEDYNYSPIFWRK 754
            ...:|:...       |.||:..:    ...|. :..||  ||...|: .:| .:.|..|::..:
Zfish   454 AGISEMFEG-------HHGPITGIHCHTAAGPVDFSHLFLTASFDWTV-KLW-SNKNNKPLYSFE 509

  Fly   755 RACD-LTAVAWSETRPAVLYLTRIDGI--LEAWDILARDDDACLTEILGGGIIT----AITEHRP 812
            ...| :..|.||...||:  ...:||:  ::.|::   ::|   ||:....:..    |:...|.
Zfish   510 DNSDYVYDVMWSPVHPAL--FACVDGLGRVDLWNL---NND---TEVPTASVAVDGSPALNRLRW 566

  Fly   813 SLPHKILGIGDYNSSIRMVKLPHSFDVPLPNELDQLIKYVLKEERRKMGIQSWEQKYYELNKDII 877
            |...:.:.:||....|.:..:.....||..:|..:.::.::                 |:|::..
Zfish   567 SQSGREIAVGDSEGQIHIYDVGEQIAVPRNDEWTRFVRTLV-----------------EINENRD 614

  Fly   878 EAKREAAAEI 887
            :|:..||..:
Zfish   615 DAEELAAQRL 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmmNP_648138.1 WD40 repeat 462..505 CDD:293791 12/42 (29%)
WD40 repeat 510..547 CDD:293791 1/36 (3%)
dync1i2aNP_001429003.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..108
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..197 16/54 (30%)
WD 1. /evidence=ECO:0000255 265..314 18/67 (27%)
WD 2. /evidence=ECO:0000255 318..358 10/39 (26%)
WD 3. /evidence=ECO:0000255 367..408 11/104 (11%)
WD 4. /evidence=ECO:0000255 417..457 6/49 (12%)
WD 5. /evidence=ECO:0000255 462..507 12/53 (23%)
WD 6. /evidence=ECO:0000255 510..550 12/47 (26%)
WD 7. /evidence=ECO:0000255 556..595 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.

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