DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14838 and dync1i1

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:XP_009290517.1 Gene:dync1i1 / 561525 ZFINID:ZDB-GENE-061215-62 Length:647 Species:Danio rerio


Alignment Length:760 Identity:128/760 - (16%)
Similarity:247/760 - (32%) Gaps:247/760 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 ERWRMQRRLRKKPRRWVSHGTDEEMTIMVERFKDEPIDVEIQSVYPIQMPRHVAFDYRMTRDVRD 247
            :|..::..|.:|.:| ::...:|:.....||.|.|.   |:     :|.|.:|..|..:.|..|:
Zfish     3 DRSDLKAELERKKQR-LAQIREEKKRKEEERKKKES---EM-----LQRPENVTEDSDLDRKRRE 58

  Fly   248 --------GV---------LELLPNENIKWENVTKKRVNVSVQSAPPKIEREQQTN--------- 286
                    |:         |:||..:...:..:....::.|.||..|..|...|.:         
Zfish    59 TEALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSPPSETGSQESIDGGTVERY 123

  Fly   287 -----PTFPS---------------NAWSQYLYEIDDEDLEL-------------DETDVDEEEE 318
                 .|.||               ...:..:.:||....||             ::.:.:::||
Zfish   124 RTLQWDTDPSALQLLADSVHGCRMQRLGASKIVQIDFMPKELVTYSKETQTPVASNQPEEEDDEE 188

  Fly   319 KKKAQAKPGTYVEPEKKPPEMSAQIEMLLNTLEFNQIDSYRDDYSLISSRQV------------- 370
            ....:::|.:....|:|..|:.......|...|..|| .:.:|:.....|.:             
Zfish   189 LSVPKSEPASQQLEEEKTQEVEEVHPRELTNEEKEQI-VHSEDFLFFFDRSIRVVERVLAEDKDI 252

  Fly   371 -VQYTNPYLQ----EFLCFANIS---------KSNKRFVAGYDWYPKLSGLIAVSYAFSTPATVN 421
             ..|:...::    :....:|:|         .|..|.|...||.|:...|:..||     .|..
Zfish   253 FFDYSGRDMEDKEGDLQAGSNLSFNRHFYDEHWSKHRVVTSLDWSPQYPELLVASY-----NTNE 312

  Fly   422 EATNRVDYVQRAVLEPNPVLLWSFSDNLNYKLE-----FEAPIETTALTFCPFNGDILLGGSKNG 481
            :|.:..|.|         ||:|    |:.:|..     |.......::.|..|:.::::||:.:|
Zfish   313 DAPHEPDGV---------VLVW----NMKFKKATPEYIFHCQSSVMSVGFAQFHPNLVIGGTYSG 364

  Fly   482 QVVLWDLQGRCEKLDEEEYLTAAQAKYRIMIGEFLNWTIDIEDNVIVPATISLLDCSPKGAITAF 546
            |:.:||.:.......:...|:|....:.:..           .||:.....:.|           
Zfish   365 QIAMWDNRSHRRTPVQRTPLSATAHTHPVYC-----------VNVVGTQNANNL----------- 407

  Fly   547 YWLGRSIYLSQFGKVYNDPDIRNHHKFFVTCAFDGTISFWDLDGKGGKSAKDKMRNRMLPKELTQ 611
                                        :|.:.||.:..|.||                  .|:|
Zfish   408 ----------------------------ITVSTDGKMCSWSLD------------------MLSQ 426

  Fly   612 SESAFKSMVIKPTYNLYFPEPITGIIADTSCLSCLTPVAKLIQANPSNYPIKTIAKDPPTMRQSM 676
            .:.:.:.:     ||...|..:|       |::               :|...:        .:.
Zfish   427 PQESMELI-----YNKSKPVAVT-------CMA---------------FPASDV--------NNY 456

  Fly   677 IVSTFYGHVSRIDWQGTYTEGEATEVINSSIPFAMVHDGPVVMVK-KNPFYPELFASIGRT---- 736
            :|.:..|.|......|  ::....|:.:.       |.|||..:. .|...|..|:.:..|    
Zfish   457 VVGSEEGTVYTASRHG--SKAGIGEIFDG-------HQGPVTGISCHNAVGPVDFSHLFTTSSFD 512

  Fly   737 -ILAIWKEDYNYSPIF-WRKRACDLTAVAWSETRPAVLYLTRIDGILEAWDILARDDDACLTEIL 799
             .:.:|...:| .|:: :...|..:..|.||...||:......:|.|:.|::....:....:..:
Zfish   513 WTVKLWSTKHN-KPLYSFEDNADYVYDVMWSPVHPALFATVDGNGRLDLWNLNNYTEVPSASVSV 576

  Fly   800 GGGIITAITEHRPSLPHKILGIGDYNSSI------RMVKLPHSFD 838
            .||  .|:...|.:...:.:.:||....:      ..:.:||:.|
Zfish   577 EGG--CALNRVRWASGGREVAVGDSEGRVWIYDVGEQLAVPHTDD 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 50/302 (17%)
WD40 repeat 462..505 CDD:293791 10/42 (24%)
WD40 repeat 510..547 CDD:293791 3/36 (8%)
RE_R_Pab1 807..>863 CDD:286594 6/38 (16%)
dync1i1XP_009290517.1 Dynein_IC2 147..175 CDD:288403 4/27 (15%)
WD40 215..608 CDD:225201 86/526 (16%)
WD40 284..607 CDD:295369 77/455 (17%)
WD40 repeat 292..337 CDD:293791 15/62 (24%)
WD40 repeat 347..388 CDD:293791 10/40 (25%)
WD40 repeat 394..437 CDD:293791 12/115 (10%)
WD40 repeat 443..490 CDD:293791 12/85 (14%)
WD40 repeat 498..530 CDD:293791 6/32 (19%)
WD40 repeat 536..574 CDD:293791 8/37 (22%)
WD40 repeat 582..608 CDD:293791 3/25 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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