DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14838 and dnai1.2

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001074027.1 Gene:dnai1.2 / 555705 ZFINID:ZDB-GENE-070112-1302 Length:660 Species:Danio rerio


Alignment Length:860 Identity:163/860 - (18%)
Similarity:279/860 - (32%) Gaps:291/860 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EVGINVTQEFPWKQ----VQFKDLRDVLFDELENSAELMKKFKNFNPEHFILIGFCPLLTEQEDD 153
            |.||:......|.|    |:..|..|:..:||:.  |:.:                 :||....:
Zfish    40 EEGIDTADGEEWMQGKTLVKPPDQLDLTEEELKE--EITR-----------------VLTANNPN 85

  Fly   154 PPEGEPFIFYSSIKES--KMAMSIIQNMEHFE-RWRMQRRLRKKPRRWVSHGTDEEMTIMVERFK 215
            .|:.   :...|.||.  |..:.:.|...||| ...:..:...:.||.::..|:.|.....||.:
Zfish    86 APQN---VVRYSFKEGCYKTIVFVDQMAIHFELEGNLVHKESDEGRRLMAKHTEREDCGGDERLE 147

  Fly   216 DEPIDVEIQSVYPIQMPRHVAFDYRMTRDVRDGVLELLPNENIKWENVTKKRVNVSVQSAPPKIE 280
            :.||.       |.:..:.|...:... |.....|..||.|             :|.|:.||   
Zfish   148 NVPIK-------PGKREQKVTNQFNFI-DRASQTLNNLPRE-------------ISCQTEPP--- 188

  Fly   281 REQQTNPTFPSNAWSQYLYEIDD--------EDLELDETDVDEEEEKKK---AQAKPGTYVEPEK 334
              .:.|.:..:|.|..|.:.:::        |..|....:.:|:..|||   |:|:... :....
Zfish   189 --PRANFSATANQWEIYDFYVEELQRREKSKEKQESQFPNKEEDRSKKKMIQAEAQSDD-ISQLA 250

  Fly   335 KPPEMSAQIEMLLNTLEFNQI-----------DSYRDDYSLISSRQVVQYTNPYLQEFLCFANIS 388
            ||.|:   ||.::|...|:::           |.:|.:...:......||              .
Zfish   251 KPAEI---IERMVNQNIFDEVAQDFMYFEDAADEFRGEKGTLLPLWKFQY--------------D 298

  Fly   389 KSNKRFVAGYDWYPKLSGLIAV---SYAFSTPATVNEATNRVDYVQRAVLEPNP----------- 439
            |:....|....|....|.|.||   ||.|    |..|....:.|..:     ||           
Zfish   299 KAKGLSVTALCWNHIYSDLFAVGLGSYEF----TQQERGMLLFYTLK-----NPSFPEFIFNTDS 354

  Fly   440 -VLLWSFSDNLNYKLEFEAPIETTALTFCPFNGDILLGGSKNGQVVLWDLQGRCEKLDEEEYLT- 502
             |:.....:.|:|                     ::..|..:|.|.::||:   :|.|:..|.: 
Zfish   355 GVMCVDIHEQLSY---------------------LVAVGLYDGCVSVYDLR---KKSDQPMYNSI 395

  Fly   503 AAQAKYRIMIGEFLNWTIDIEDNVIVPATISLLDCSPKGAITAFYWLGRSIYLSQFGKVYNDPDI 567
            |:..|:                               .||:....|              ...|:
Zfish   396 ASSGKH-------------------------------TGAVWQVKW--------------QKDDL 415

  Fly   568 RNHHKFFVTCAFDGTISFWDLDGKGGKSAKDKMRNRMLPKELTQSESAFKSMVIKPTYNLYFPEP 632
            .::|.|| :.:.||.:..|                     .|.:.|..|..::..|..: ..|:.
Zfish   416 DSNHNFF-SVSTDGRVVSW---------------------TLVKHEIVFTDIIKLPPVD-KVPDD 457

  Fly   633 ITGIIADTSCLSCLTPVAKLIQANPSNYPIKTIAKDPPTMRQS---MIVSTFYGHVSRIDWQGTY 694
            :..::|                         |........:|.   .:|.|..|.:.:   ...|
Zfish   458 LKNVVA-------------------------TAGTSLDFHKQKDHHFLVGTEAGKIHK---GSKY 494

  Fly   695 TEGEATEVINSSIPFAMVHDGPVVMVKKNPFYPELFASIG-RTILAIWKEDYNYSPIFWRKRACD 758
            ...:..|:.::       |...|..|:.|||:|.:|.|.| ..::.||....| ||:|..:....
Zfish   495 YSSKFLEMYDA-------HFMTVSCVRWNPFHPNVFISCGWDWMVKIWDHTIN-SPVFTFELKSS 551

  Fly   759 LTAVAWSETRPAVLYLTRIDGILEAWDILARDDDA-CLTEILGGGIITAITEHRPSLPHKILGIG 822
            :|.||||.....|......||.:..:|:.....:| |..:::.........|..|  .|.|:.:|
Zfish   552 VTDVAWSPHSSTVFAAVTADGKVHVFDLSINKYEALCQQKVVSKKTRLLHIEFNP--VHPIIIVG 614

  Fly   823 DYNSSIRMVKLPHSFDVPLPNELDQLIKYVLKEERRKMGIQSWEQKYYELNKDIIEAKREAAAEI 887
            |....:..:||.       ||         |:::.:       |:|..||.|.            
Zfish   615 DDRGRVISLKLS-------PN---------LRKKPK-------EKKGQELPKG------------ 644

  Fly   888 RKEMEKKEKEEQLAS 902
             .|:|..:.|:.|:|
Zfish   645 -PEVEIAKMEQLLSS 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 49/297 (16%)
WD40 repeat 462..505 CDD:293791 9/43 (21%)
WD40 repeat 510..547 CDD:293791 2/36 (6%)
RE_R_Pab1 807..>863 CDD:286594 11/55 (20%)
dnai1.2NP_001074027.1 WD40 <296..650 CDD:225201 98/542 (18%)
WD40 354..620 CDD:295369 69/395 (17%)
WD40 repeat 357..397 CDD:293791 10/63 (16%)
WD40 repeat 405..485 CDD:293791 18/141 (13%)
WD40 repeat 511..547 CDD:293791 14/36 (39%)
WD40 repeat 552..591 CDD:293791 11/38 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.