DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmm and Dnai1

DIOPT Version :10

Sequence 1:NP_648138.1 Gene:mmm / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001019513.1 Gene:Dnai1 / 500442 RGDID:1565671 Length:705 Species:Rattus norvegicus


Alignment Length:400 Identity:78/400 - (19%)
Similarity:134/400 - (33%) Gaps:127/400 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 QSAPPKIEREQQTNPTFPSNAWSQYLYEIDDEDLELDETDVDEEEEKKKAQAKPGTYVEPEKKPP 337
            |..||     .:||.:..:|.|..|...:|    ||::.:..:|:||.|......|.....:|..
  Rat   217 QMEPP-----PRTNFSATANQWEIYDAYVD----ELEKLEKTKEKEKTKTPVAKKTEKMAMRKLT 272

  Fly   338 EMSAQ-------------IEMLLNTLEFNQI-----------DSYRDDYSLISSRQVVQYTNPYL 378
            .|.:|             :|.::|...::.:           |.|||....             |
  Rat   273 SMESQSDDITKVTQAAKIVERMVNQNTYDDVAQDFKYYEDAADEYRDQEGT-------------L 324

  Fly   379 QEFLCFANISKSNKRFVAGYDWYPKLSGLIAV---SYAF----------------STPATVNEAT 424
            .....|.| .|:.:..|....|.||...|.||   ||.|                |.|..:..:.
  Rat   325 LPLWKFQN-DKAKRLAVTALCWNPKYKDLFAVGHGSYDFMKQSRGMLLLYSMKNPSFPEYMFSSE 388

  Fly   425 NRVDYVQRAVLEPNPVLLWSFSDNLN-YKLEFEAPIETTALTFCPFNGDILLGGSKNGQVV--LW 486
            :.:..:...:..|..|::..:..|:. |.|:            .|.:.......||:|:..  :|
  Rat   389 SGIMCLDMHMDHPYLVVVGYYDGNVAIYNLK------------KPHSQPCFRSTSKSGKHTDPVW 441

  Fly   487 DLQGRCEKLDEEEYLTAAQAKYRIMIGEFLNWTIDIEDNVIVPATISL------------LDCSP 539
            .::.:.:.:|......:..:.     |..::||: ::..::....|.|            |....
  Rat   442 QVKWQKDDMDHNLNFFSVSSD-----GRIVSWTL-VKSELVHIDVIKLKDEGSTTEIPEGLQLHT 500

  Fly   540 KGAITAF-------------------YWLGRSIYLSQFGKVYN------DPDIRN--HHKFFVTC 577
            .|..|||                   |...:| |.|||...|:      |..:.|  |.:.|::|
  Rat   501 VGCGTAFDFHKEIDYLFLVGTEEGKIYKCSKS-YSSQFLDTYDAHNMAVDAVLWNPYHARVFISC 564

  Fly   578 AFDGTISFWD 587
            :.|.|:..||
  Rat   565 SSDWTVKIWD 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmmNP_648138.1 WD40 repeat 462..505 CDD:293791 6/44 (14%)
WD40 repeat 510..547 CDD:293791 10/67 (15%)
Dnai1NP_001019513.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..169
WD40 repeat 340..386 CDD:293791 12/45 (27%)
WD40 <358..616 CDD:475233 41/235 (17%)
WD 1 386..426 6/51 (12%)
WD40 repeat 392..433 CDD:293791 7/52 (13%)
WD 2 435..478 5/48 (10%)
WD40 repeat 440..494 CDD:293791 7/59 (12%)
WD40 repeat 505..542 CDD:293791 9/37 (24%)
WD 3 543..583 8/31 (26%)
WD40 repeat 548..587 CDD:293791 8/26 (31%)
WD 4 585..625
WD40 repeat 590..631 CDD:293791
WD 5 633..672
Blue background indicates that the domain is not in the aligned region.

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