DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14838 and dync2i2

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:XP_012823678.1 Gene:dync2i2 / 448417 XenbaseID:XB-GENE-953027 Length:503 Species:Xenopus tropicalis


Alignment Length:544 Identity:93/544 - (17%)
Similarity:162/544 - (29%) Gaps:193/544 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 SYRDDYSLISSRQVVQYTNPYLQEFLCFANISKSNKRFVAGYDWYPKLSGLIAVSYA------FS 415
            ::.:.:..::....:||.:. |::.|...::|            :.....:||.||.      :|
 Frog   105 NWEEQHEQVTCLHSLQYPDA-LEQQLQVTSVS------------WNSTGSIIACSYGRFGDGDWS 156

  Fly   416 TPATVNEATNRVDYVQRAVLEPNPVLLWS-----FSDNLNYKLEFEAPIETTALTFCPFNGDILL 475
            |                   |.:.|..|:     |:.| |.....:.|.....|.:.|....::.
 Frog   157 T-------------------EKSYVCTWNLDRRGFNAN-NPDTVLDVPSSVMCLAWHPSQPSLIA 201

  Fly   476 GGSKNGQVVLWD-------LQGRCEKLDEEEYLTAAQAKYRIMIGEFLNWTIDIEDNVIVPATIS 533
            ||..||.|::||       |.||...:.:    |...|.|                         
 Frog   202 GGLFNGDVLVWDTSRTDDPLIGRTGHVGD----THTDAVY------------------------- 237

  Fly   534 LLDCSPKGAITAFYWLGRSIYLSQFGKVYNDPDIRNHHKFFVTCAFDGTISFWDLDGKGGKSAKD 598
                                   |.|.:........|..|.|:.  ||.|..|.::.:|.....|
 Frog   238 -----------------------QVGWMQEKSQGHRHQVFSVSS--DGKILVWQMEKEGHLVLLD 277

  Fly   599 KMRNRMLPKELTQSESAFKSMVIKP------------TYNLYFPEPITGIIADTSCLSCLTPVAK 651
            ..       .|...:....:.:.||            :|:.:.|......:.....|.|.:.|..
 Frog   278 GF-------ALVAQQIPSNTKIHKPGRGDTAVGVTCLSYSHFDPSLFIVGVEGGYLLKCSSSVQT 335

  Fly   652 LIQAN-PSNYPIKTIAKDPPTMRQSMIVSTFYGHVSRIDWQGTYTEGEATEVINSSIPFAMVHDG 715
            |...| .|:.|::..|                        |.|::.                |.|
 Frog   336 LAPINMGSSVPLRAPA------------------------QFTFSP----------------HGG 360

  Fly   716 PVVMVKKNPFYPELFASIGRTILAIWKEDYNYSPIFWRKRACDLT----------AVAWSETRPA 770
            ||..|..:||:..||.|.|..         .::.::...:|..|.          ::.||..||.
 Frog   361 PVYSVTCSPFHRNLFLSAGTD---------GHAHLYSMLQAKPLVSLQLSQKYLFSIRWSPVRPL 416

  Fly   771 VLYLTRIDGILEAWDILA--RDDDACLTEILGGGIITAIT-EHRPSLPHKILGIGDYNSSIRMVK 832
            |......||.:...|...  :....|:.:...|..:..:. .|..|   ::|..||...::::.:
 Frog   417 VFAAASGDGEVVLVDFAKSFQKPSLCIKQTASGRPVYCLEFNHAQS---QLLAAGDGTGTVKIWQ 478

  Fly   833 LPHSFDVPLPNE---LDQLIKYVL 853
            |...|......|   ||::...|:
 Frog   479 LSSDFIEQRARETALLDEIASEVV 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 43/259 (17%)
WD40 repeat 462..505 CDD:293791 13/49 (27%)
WD40 repeat 510..547 CDD:293791 0/36 (0%)
RE_R_Pab1 807..>863 CDD:286594 11/51 (22%)
dync2i2XP_012823678.1 WD40 repeat 131..182 CDD:293791 13/82 (16%)
WD40 184..481 CDD:392136 71/409 (17%)
WD40 repeat 188..227 CDD:293791 12/38 (32%)
WD40 repeat 236..297 CDD:293791 15/117 (13%)
WD40 repeat 305..355 CDD:293791 11/73 (15%)
WD40 repeat 362..399 CDD:293791 10/45 (22%)
WD40 repeat 405..446 CDD:293791 9/40 (23%)
WD40 repeat 452..477 CDD:293791 5/27 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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