DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14838 and CG9313

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster


Alignment Length:788 Identity:142/788 - (18%)
Similarity:243/788 - (30%) Gaps:302/788 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 YPIQMPRHVAFDYRMTRDV----------------RDGVLELLPNENIKWEN------------- 262
            ||:.||.:...:.|.|.:|                :|..:|   :|:::.|:             
  Fly   128 YPLPMPNYTVVEQRETDNVDGEEGEGEEDDDGATAKDAAVE---DEDVEEEDDEEAKGTEGDEGE 189

  Fly   263 ------------------------VTKKRV--------------------NVSVQSAPPKIEREQ 283
                                    .:|||.                    ||..|:.||  .|.|
  Fly   190 GEGEGEGAAARQEDDEPAHQAAAVSSKKRKLINQFNYCERGALTYTNPKRNVDTQTIPP--PRSQ 252

  Fly   284 QTNPTFPSNAWSQYLYEIDDEDLELDETDVDEEEEKKKAQAKPGTYVEPEKKPPEMSAQIE---- 344
                 |.:|.....:|:...|:....:.|..::||:|:.:.        |||..:.||..|    
  Fly   253 -----FGANVLQWVIYDSYMENFAESQKDGTKKEERKRGKR--------EKKFRDKSAIAEQLNK 304

  Fly   345 -------MLLNTLEFNQIDSYRDDYSLISSRQVVQYTNPYLQEF---------LCFANISKSNKR 393
                   :|...:..|..|....||         :|......||         |......|:.|.
  Fly   305 KYLKCWQILERMINQNIYDDIAHDY---------RYWEDPADEFREGEGNLLPLWKFQYDKTKKM 360

  Fly   394 FVAGYDWYPKLSGLIAV---SYAFSTPATVNEATNRVDYVQRAVLEPNPVLLWSFSDNLNYKLEF 455
            .|....:.|....|.||   |:.|.      :.||. .|:....:: ||    ||.|.:      
  Fly   361 NVTDILFNPSYYDLFAVCFGSHDFM------KQTNE-GYLCLFTVK-NP----SFPDYI------ 407

  Fly   456 EAPIETTALTFC-------PFNGDILLGGSKNGQVVLWDLQGRCEKLDEEEYLT-AAQAKYRIMI 512
               |:|.....|       ||   :.:.|..:|.|.:::|:..|:   |..|:: ....|:...:
  Fly   408 ---IQTDCGVMCCDIHPTYPF---LAVIGLYDGNVAVYNLREDCK---EPLYVSRGVNCKHGECV 463

  Fly   513 GEFLNWTIDIEDNVIVPATISLLDCSPKGAITAFYWLGRSIYLSQFGKVYNDPDIRNHHKFFVTC 577
            .: :.|.:|:.|                |.:..|       .:|..|:|:|  .|...:|.:||.
  Fly   464 WQ-IKWGLDMAD----------------GEVNFF-------SVSSDGRVFN--WILMQNKLWVTT 502

  Fly   578 AF-----DGTISFWDLDGKGGKSAKDKMRNRMLPKELTQSESAFKSMVIKPTYNLYFPEPITGII 637
            ..     :|.:     ||..|.....|              |....||..|..|..|       :
  Fly   503 IITLYRENGLV-----DGPDGTKVTLK--------------SGGSCMVFHPVDNKIF-------L 541

  Fly   638 ADTSC---LSCLTPVAKLIQANPSNYPIKTIAKDPPTMRQSMIVSTFYGH---VSRIDWQGTYTE 696
            ..|.|   ..|.|       |..|.|                 :.|:|.|   |.|||:      
  Fly   542 VGTECGYIYKCST-------AFSSKY-----------------LMTYYAHNMSVYRIDF------ 576

  Fly   697 GEATEVINSSIPFAMVHDGPVVMVKKNPFYPELFASIGRT-ILAIWKEDYNYSPIFWRKRACDLT 760
                                      |.|...:|.|.|.. ::.:| ||....|:|.......:.
  Fly   577 --------------------------NRFNSNIFVSCGADWMVKVW-EDMRPDPLFIFDLGAAVG 614

  Fly   761 AVAWSETRPAVLYLTRIDGILEAWDILARDDDA-CLTEILGGGIITAITEHRPSLPHKILGIGDY 824
            .|.|:.....|......:|.:..:|:......| |:..::            |...:|:..: .:
  Fly   615 DVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVV------------PKRKNKLTRL-SF 666

  Fly   825 NSSIRMVKLPHSFDVPLPNELDQLIKYVLKEERRKMGIQSWE------QKYYELNKDIIE---AK 880
            |..:..:.:.....|....:|...::.::|..::::.:....      :|...|.:::.|   |.
  Fly   667 NEKLAFIVVGDEKGVTTSLKLSPNLRMMVKPPKKQLYLDQNTLQIGKLEKLLSLVRELPEGSTAV 731

  Fly   881 REAAAEIR 888
            .:||..:|
  Fly   732 PDAATTVR 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 62/306 (20%)
WD40 repeat 462..505 CDD:293791 10/50 (20%)
WD40 repeat 510..547 CDD:293791 4/36 (11%)
RE_R_Pab1 807..>863 CDD:286594 6/55 (11%)
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 91/501 (18%)
WD40 repeat 362..412 CDD:293791 17/70 (24%)
WD40 413..640 CDD:295369 63/341 (18%)
WD40 repeat 415..454 CDD:293791 10/44 (23%)
WD40 repeat 463..505 CDD:293791 13/67 (19%)
WD40 repeat 513..557 CDD:293791 15/76 (20%)
WD40 repeat 571..608 CDD:293791 14/69 (20%)
WD40 repeat 613..654 CDD:293791 7/40 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435243
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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