DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14838 and CG1571

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster


Alignment Length:895 Identity:152/895 - (16%)
Similarity:281/895 - (31%) Gaps:316/895 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 ERWRMQRRLRKKPRRWVSHGTDEEMTIMV-----ERFKDEPIDVEIQSVYPIQMPRHVAFDYRMT 242
            ||.|..|:.|.:.|        .|:.:.|     :|.|           |.:..|..     :.|
  Fly    11 ERRRFGRQCRFQDR--------NELMVSVHPSGRQRLK-----------YIMANPSE-----KST 51

  Fly   243 RDVRDGVLELLPNENI--------KWENVTKKRVNVS----VQSAPPKIEREQQTNPTFPSNAWS 295
            :..|...|.::..||:        .:|....|.||.:    .|....|:|||         ::|.
  Fly    52 QLSRQMALTVMETENVTLDQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVERE---------DSWG 107

  Fly   296 QYLYEIDDEDLELDETDVDEEEEKKKAQAKPGTYVEPEKKPPEMSAQIEMLLNTLEFNQIDSYRD 360
            :.:       |.:..|.:...|:..........:.:   .|||:...|:|.......|   .:.|
  Fly   108 EQV-------LSMIRTTMSVAEQNNTLNIYQNFFAD---LPPELGHDIKMRFRARVAN---VFHD 159

  Fly   361 DYSLISSRQVVQYTNPYLQEFLCFANISKSNKRFVAGYDWYPKLSGLIAVSYA--FSTPATVNEA 423
            .:  :.:||                         :...:|.|..|......|.  |:....:...
  Fly   160 LW--LPARQ-------------------------LRSIEWMPNNSRQFMTQYTNHFAKGERLRPV 197

  Fly   424 TNRVDYVQRAVLEP----NPVLLWSFSDNLNYKLEFEAPIETTALTFCPFNGDILLGGSKNGQVV 484
            |:          ||    |...:|...:.|..::.:::..:.:....||.:.:.::||:..|||.
  Fly   198 TD----------EPFGGTNGFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVC 252

  Fly   485 LWDLQGRCEKLDEEEYLTAAQAKYRIMIGEFLNWTIDIEDNVIVPATISLLDCSPKGAITAFYWL 549
            ||                          |.|...         :|.....|:.|.:...:|..|:
  Fly   253 LW--------------------------GTFKGG---------LPIRNCPLEVSHRETTSALCWV 282

  Fly   550 GRSIYLSQFGKVYNDPDIRNHHKF---FVTCAFDGTISFWDLDGKGGKSAKDKMRNRMLPKELTQ 611
                                |.|.   |.:.:.||:|.:||.     :..|..|:..:|..|..:
  Fly   283 --------------------HSKSNTEFYSGSLDGSIKYWDT-----RDLKMPMQELLLEPEPQE 322

  Fly   612 SESAFKSMVIKPTYNLYFPEPITGIIADTSCLSCLTPVAKLIQANPSNYPIKTIAKDPPTMRQSM 676
            .:|...|..:                                          |:.:...|:....
  Fly   323 RQSRMDSHGV------------------------------------------TVLEFEYTIPVRF 345

  Fly   677 IVSTFYGHVSRIDWQGTYTEGEATEVINSSIPFAMVHDGPVVMVKKNPFYPELFASIGRTILAIW 741
            |:.:..|||...:.:|       ...:.:.:....:..|||..:.:|||:.:.|...|.....||
  Fly   346 IIGSDMGHVFVGNRKG-------MTPMETLLAHYQLFVGPVRSINRNPFFVKNFLVTGDWRARIW 403

  Fly   742 KEDYNYSP--IFWRKRACDLTAVAWSETRPAVLYLTRIDGILEAWDILAR--------DDDACLT 796
            .|:...||  :::||.| .:...|||..|.::.....|:|:::.||:|..        |....:.
  Fly   404 SEEVKDSPSTMYFRKNA-QILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKPIRSVDFKVAIA 467

  Fly   797 EILGGGIITAITEHRPSLPHKILGIGDYNSSIRMVKLPHSFDVPLPNELDQLIKYVLKEERRKMG 861
            :::          .||.  ..:|.||..|....::            .||:.::....:|:..|.
  Fly   468 DLV----------FRPE--GDLLAIGLKNGDTHIM------------TLDESMRQATGKEKALMA 508

  Fly   862 IQSWEQ----KYYELNKDIIEAKREAAAEIRKEMEKKEKEEQLASRKKGQKSGEDGG----EGGE 918
            .....:    |..|...|.:..||:...  ..|.|:..|::|||...:......|..    ||.|
  Fly   509 AMFEREIVRCKLLEARYDEVRLKRKTLQ--MAEEERVRKQQQLAPTLELDPDNPDQFVMMIEGDE 571

  Fly   919 EIKGKKNYSGLNYNEKMAVKWDELNLNRMMTILMS--RKQMDPEKLARETALEKERHAYEAAKKK 981
            |.:                    ..:.....|::|  ||:...:.:...|..|:    :..|.:|
  Fly   572 EFR--------------------TAITEFQDIILSVERKRSKRQVIMERTVFEE----WNPADEK 612

  Fly   982 SHLDILATVENDIANIRSRILPLELQDMQRSEMIAERVKREVENADSYEK 1031
                                       :|...::..:.:|:|:.:.:|:|
  Fly   613 ---------------------------LQGEPVVYTKPERKVQTSGNYDK 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 45/279 (16%)
WD40 repeat 462..505 CDD:293791 9/42 (21%)
WD40 repeat 510..547 CDD:293791 6/36 (17%)
RE_R_Pab1 807..>863 CDD:286594 10/55 (18%)
CG1571NP_572435.1 WD40 210..462 CDD:295369 64/361 (18%)
WD40 211..>488 CDD:225201 71/398 (18%)
WD40 repeat 229..269 CDD:293791 12/74 (16%)
WD40 repeat 277..325 CDD:293791 14/72 (19%)
WD40 repeat 332..369 CDD:293791 7/85 (8%)
WD40 repeat 379..415 CDD:293791 11/35 (31%)
WD40 repeat 422..447 CDD:293791 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435257
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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