DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14838 and Dync2i1

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:XP_006515843.1 Gene:Dync2i1 / 217935 MGIID:2445085 Length:1033 Species:Mus musculus


Alignment Length:979 Identity:176/979 - (17%)
Similarity:290/979 - (29%) Gaps:367/979 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STTDIEVPGKSEIDGDLEGLPIDSEVTDVAAPLSSRRSKPYFKK--FKE---------------- 48
            |.:|.||..:.......|||..|.|.....|....|.||...||  .||                
Mouse   284 SLSDREVEDRHREKRHKEGLHYDDERRRSHADKKERSSKEEHKKRELKELEKEDNDLEATGPDEY 348

  Fly    49 -PDSDEDVADPRQLFNVQESWRTLMSLSSCQKVMVSEKAQKALKIEVGINVTQEFPWKQV-QFKD 111
             |:.::|..|....|.|.:.     ...|..:....|||             :|.|..|. :.::
Mouse   349 LPNLEDDFVDYEDDFEVCDG-----DDDSNNEHEAREKA-------------EELPLAQKREIQE 395

  Fly   112 LRDVLFDELENSAEL-MKKFK-----NFNPEHFILIGFCPLLTEQEDDP---PEGEPFIFYSSIK 167
            ::..:..|.|...|| :|.|:     .:..|.:         |:..|.|   |....|:.:::  
Mouse   396 IQKAISAENERVGELSLKMFQKQGWTEYTKEPW---------TDANDSPSRTPVCGIFVDFAT-- 449

  Fly   168 ESKMAMSIIQNMEHFERWRMQRRLRKKPRRWVSHGTDEEMTIMVERFKDEPIDVEIQSVYPIQMP 232
                       ..|.::.|.| .|::|.|                               ..::.
Mouse   450 -----------ASHRQKSRSQ-ALKQKTR-------------------------------SSKLL 471

  Fly   233 RHVAFDYRMTRDVRDGVLELLP-NE-NIKWENVTKKRVNVS-VQSAPPKIEREQQTNPTFPSNAW 294
            |.:..|:..|    ..:|:|.| || ::...|..||....: ||.....:||:.||........|
Mouse   472 RLIDLDFSFT----FSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVERDIQTEDIETREVW 532

  Fly   295 SQYLYE---IDDEDLELDETDVDEEEEKKKAQAKPGTYVEPEKKPPEMSAQIEMLLNTLEFNQID 356
            :|:..|   :.....|.|.:||.               |.|:...|.       |.|.|      
Mouse   533 TQHPGEGTAVSGGSEEKDFSDVT---------------VVPKIDTPR-------LANFL------ 569

  Fly   357 SYRDDYSLISSRQVVQYTNPYLQEFLCFANISKSNKRFVAGYDWYPKLSGLIAVSYAFSTPATVN 421
                       |...|.....|:|           .|..||..|.|:     |...|.:...:.:
Mouse   570 -----------RAACQVVAVLLEE-----------DRLAAGPSWIPR-----AQDKALNISDSSS 607

  Fly   422 EATNRVDYVQ--------------RAVLEPNPVLLWSFSDNLNYK-----------------LEF 455
            :....:.::|              :.|:..:.:...:|:.:|:.:                 |..
Mouse   608 QLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFAPSLDSRHLLCVWDIWQPSGPQKVLIC 672

  Fly   456 EAPIETTALTFCPFNGDILLGGSKNGQVVLWDLQGRCEKLDEEEYLTAAQAKYRIMIGEFLNWTI 520
            |:.:  |...|.|....:|..|:.:|.||:|||:   |......|:..:...:......|..   
Mouse   673 ESKV--TCCCFSPLKAFLLFAGTVHGSVVVWDLR---EDSRIHHYVRLSNCFWAFRTPTFST--- 729

  Fly   521 DIEDNVIVPATISLLDCSPKGAI----TAFYWLGRSIYLSQFGKVYNDPDIRNHHKFFVTCAFD- 580
               |.::.    |:...||..||    |:.| ..:|..||.|........:..|     ..:.| 
Mouse   730 ---DGILT----SVNHRSPLQAIEPVATSAY-KKQSFVLSPFSTQEEMAGLSFH-----IASLDE 781

  Fly   581 -GTISFW--------DLDGK--------GGKSAKDKMRNRMLPKELTQSESAFKSMVIKPTYNLY 628
             |.::.|        |:.|.        ||:..........|...|:..:|.             
Mouse   782 TGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGNSLSHKDSE------------- 833

  Fly   629 FPEPITGIIADTSCLSCLTPVAKLIQANPSNYPIKTIAKDPPTMRQSMIVSTFYG---HVSRIDW 690
                   :...|..||     .|.:.::|:::                :|.|..|   |.:|.||
Mouse   834 -------LWGSTQTLS-----VKFLPSDPNHF----------------VVGTDMGLISHSTRQDW 870

  Fly   691 QGTYTEGEATEVINSSIPFAMVHDGPVVMVKKNPFYPEL------------FASIGRTILAIWKE 743
            :                            |....|.||.            |:....|:......
Mouse   871 R----------------------------VSPRVFKPEQHGVRPIKVNVIDFSPFEETVFLAGCS 907

  Fly   744 D--------YNYSPIF-WRKRACD--LTAVAWSETRPAVLYLTRIDGILEAWDILARDDDACLTE 797
            |        .:..||. |......  :|::.||.|||||..:......:..||:|..|       
Mouse   908 DGSIRLHQLTSERPIMQWDNSTSGHAVTSLQWSPTRPAVFLVQDDASRIYVWDLLEND------- 965

  Fly   798 ILGGGIITAITEHRPSLPHKILGI----------GDY--------NSSIRMVKLPHSFDVPLPNE 844
             ||.      ...:|..|.|::.:          |.:        :.::.:..|...:..|..:|
Mouse   966 -LGP------VAQQPISPDKLVAMTIVGEPEKTSGSFVALVLARTSGTVDVQNLKRRWTTPAVDE 1023

  Fly   845 LDQL 848
            ..||
Mouse  1024 HSQL 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 57/323 (18%)
WD40 repeat 462..505 CDD:293791 13/42 (31%)
WD40 repeat 510..547 CDD:293791 8/40 (20%)
RE_R_Pab1 807..>863 CDD:286594 9/60 (15%)
Dync2i1XP_006515843.1 PTZ00121 <48..396 CDD:173412 29/129 (22%)
WD40 604..1000 CDD:225201 83/499 (17%)
WD40 repeat 635..671 CDD:293791 2/35 (6%)
WD40 repeat 676..708 CDD:293791 12/36 (33%)
WD40 repeat 715..752 CDD:293791 8/46 (17%)
WD40 repeat 759..788 CDD:293791 6/33 (18%)
WD40 repeat 842..878 CDD:293791 11/84 (13%)
WD40 repeat 890..926 CDD:293791 5/35 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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