DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14838 and Dync1i2

DIOPT Version :9

Sequence 1:NP_648138.1 Gene:CG14838 / 38851 FlyBaseID:FBgn0035799 Length:1132 Species:Drosophila melanogaster
Sequence 2:NP_001185801.1 Gene:Dync1i2 / 13427 MGIID:107750 Length:655 Species:Mus musculus


Alignment Length:710 Identity:137/710 - (19%)
Similarity:237/710 - (33%) Gaps:238/710 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 TRDVRDGVLELLPNENIKWE---NVTKKRVNVSVQSAPPKIEREQQTNPTFPSNAWSQYLYEIDD 303
            ::|..||.   :.:..:.|:   :|.:...:..:...|.|:...:.|...||......|..|   
Mouse   118 SQDSGDGA---VGSRTLHWDTDPSVLQLHSDSDLGRGPIKLGMAKITQVDFPPREIVTYTKE--- 176

  Fly   304 EDLELDETDV------DEEEEKKKAQAKPGTYVEPE-------------KKPPEMSAQIE--MLL 347
                 .:|.|      |||||...|..||.  ||||             |.||....:.|  .:|
Mouse   177 -----TQTPVTAQPKEDEEEEDDVATPKPP--VEPEEEKTLKKDEENDSKAPPHELTEEEKQQIL 234

  Fly   348 NTLEFNQIDSYRDDYSLISSRQVVQYTNPYLQ-----------EFLCFANISK---------SNK 392
            ::.||.   |:.|..:.|..|.:.:..|.:..           |....|.:|.         |..
Mouse   235 HSEEFL---SFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKH 296

  Fly   393 RFVAGYDWYPKLSGLIAVSYAFSTPATVNEATNRVDYVQRAVLEPNPV-LLWSFSDNLNYK---- 452
            |.|:..||..:...|:..||           .|.    :.|..||:.| |:|    |:.||    
Mouse   297 RVVSCLDWSSQYPELLVASY-----------NNN----EEAPHEPDGVALVW----NMKYKKTTP 342

  Fly   453 -LEFEAPIETTALTFCPFNGDILLGGSKNGQVVLWDLQGRCEKLDEEEYLTAAQAKYRIMIGEFL 516
             ..|.......:.||..|:.::::||:.:||:||||.:.......:...|:||...:.:.     
Mouse   343 EYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVY----- 402

  Fly   517 NWTIDIEDNVIVPATISLLDCSPKGAITAFYWLGRSIYLSQFGKVYNDPDIRNHHKFFVTCAFDG 581
                                |                        .|....:|.|. .::.:.||
Mouse   403 --------------------C------------------------VNVVGTQNAHN-LISISTDG 422

  Fly   582 TISFWDLDGKGGKSAKDKMRNRMLPKELTQSESAFKSMVIKPTYNLYFPEPITGIIADTSCLSCL 646
            .|..|.||..  ...:|.|       ||...:|                                
Mouse   423 KICSWSLDML--SHPQDSM-------ELVHKQS-------------------------------- 446

  Fly   647 TPVAKLIQANPSNYPIKTIAKDPPTMRQSMIVSTFYGHVSRIDWQGTYTEGEATEVINSSIPFAM 711
                |.:.....::|:..:        .:.:|.:..|.|......|  ::...:|:...      
Mouse   447 ----KAVAVTSMSFPVGDV--------NNFVVGSEEGSVYTACRHG--SKAGISEMFEG------ 491

  Fly   712 VHDGPVVMVKKNPF-----YPELF--ASIGRTILAIWKEDYNYSPIFWRKRACD-LTAVAWSETR 768
             |.||:..:..:..     :..||  :|...|: .:|... |..|::..:...| :..|.||.|.
Mouse   492 -HQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV-KLWTTK-NNKPLYSFEDNSDYVYDVMWSPTH 553

  Fly   769 PAVLYLTRIDGI--LEAWDILARDDDACLTEILGGGIITAITEHRPSLPHKILGIGDYNSSIRMV 831
            ||:  ...:||:  |:.|::   ::|   ||:             |:....:.|    |.::..|
Mouse   554 PAL--FACVDGMGRLDLWNL---NND---TEV-------------PTASISVEG----NPALNRV 593

  Fly   832 KLPHS-FDVPLPNELDQLIKYVLKEERRKMGIQSWE---QKYYELNKDIIEAKREAAAEI 887
            :..|| .::.:.:...|::.|.:.|:........|.   :...|:|.:..:|:.|||..|
Mouse   594 RWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEAATRI 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14838NP_648138.1 WD40 328..>599 CDD:225201 62/311 (20%)
WD40 repeat 462..505 CDD:293791 13/42 (31%)
WD40 repeat 510..547 CDD:293791 1/36 (3%)
RE_R_Pab1 807..>863 CDD:286594 9/56 (16%)
Dync1i2NP_001185801.1 Dynein_IC2 152..180 CDD:288403 7/35 (20%)
WD40 repeat 299..348 CDD:293791 17/67 (25%)
WD40 346..>616 CDD:225201 69/408 (17%)
WD40 repeat 356..394 CDD:293791 12/37 (32%)
WD40 397..>622 CDD:295369 55/363 (15%)
WD40 repeat 402..443 CDD:293791 14/99 (14%)
WD40 repeat 451..498 CDD:293791 9/63 (14%)
WD40 repeat 506..538 CDD:293791 7/33 (21%)
WD40 repeat 544..582 CDD:293791 14/58 (24%)
WD40 repeat 590..616 CDD:293791 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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