DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and MATN4

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_001380459.1 Gene:MATN4 / 8785 HGNCID:6910 Length:581 Species:Homo sapiens


Alignment Length:330 Identity:82/330 - (24%)
Similarity:123/330 - (37%) Gaps:111/330 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 ENLPGSYRCVEPLEENP--------------EITEVVENPIEKTNEVPVNVSESQPAGKTCNSGF 401
            |::..:.|.:.||.:..              .:.|....|.|:...|.|.|::.:|..:......
Human    95 EDMERAIRDLVPLAQGTMTGLAIQYAMNVAFSVAEGARPPEERVPRVAVIVTDGRPQDRVAEVAA 159

  Fly   402 QLSADGTDCQDINECEVDGPEDLDNNAVCQQKCENTIGSFRCTC----------VEGYHLLED-- 454
            |..|.|                ::..||..|:.:  :||.|...          ||.:.|:::  
Human   160 QARARG----------------IEIYAVGVQRAD--VGSLRAMASPPLDEHVFLVESFDLIQEFG 206

  Fly   455 ----QRSCALDSCTDLENPQLNRTRCAHECQDLPEGSYRCVCPKGYELSEDQHSCLVQESPCSTE 515
                .|.||:|.|.:      ....|.|.|.:.| |||.|.|..|:.|.:||.            
Human   207 LQFQSRLCAIDLCAE------GTHGCEHHCVNSP-GSYFCHCQVGFVLQQDQR------------ 252

  Fly   516 KGVEKCSPGTCLASEDNTSFSCICPTGYRSEAFSCQDIDECAEDTHLCSHTCQNTPGGYQCQCPE 580
                                             ||:.||.|:...|.|.|.|.:||||.:|.|.|
Human   253 ---------------------------------SCRAIDYCSFGNHSCQHECVSTPGGPRCHCRE 284

  Fly   581 GLNLVEE-YTCLAENLCEVNNNGCEQICLTARGGV---CACREGFRLSADGKSCE-----DVDEC 636
            |.:|..: .:|...:||...::|||..|::.  |:   |.|.||.:|.||||||.     .||..
Human   285 GHDLQPDGRSCQVRDLCNGVDHGCEFQCVSE--GLSYRCLCPEGRQLQADGKSCNRCREGHVDLV 347

  Fly   637 LVNNG 641
            |:.:|
Human   348 LLVDG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433 3/18 (17%)
FXa_inhibition 425..458 CDD:291342 10/48 (21%)
FXa_inhibition 476..505 CDD:291342 13/28 (46%)
vWFA <550..586 CDD:294047 17/35 (49%)
FXa_inhibition 596..630 CDD:291342 15/36 (42%)
FXa_inhibition 636..>664 CDD:291342 2/6 (33%)
EGF_CA 676..715 CDD:284955
FXa_inhibition 745..780 CDD:291342
FXa_inhibition 786..821 CDD:291342
FXa_inhibition 827..862 CDD:291342
FXa_inhibition 874..904 CDD:291342
FXa_inhibition 945..980 CDD:291342
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
MATN4NP_001380459.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BA2W
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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