DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frac and Cd93

DIOPT Version :9

Sequence 1:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster
Sequence 2:NP_445835.2 Gene:Cd93 / 84398 RGDID:621251 Length:643 Species:Rattus norvegicus


Alignment Length:719 Identity:170/719 - (23%)
Similarity:232/719 - (32%) Gaps:250/719 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 ENTIGSF---------RCTCVEGYHLL-----------EDQR-----SCALDSCTDLENPQLNRT 474
            |..||.|         :||    ||.|           ||..     ..:..||..        .
  Rat    86 ETKIGKFWIGLQREKGKCT----YHDLPMKGFSWVGGGEDTTYSNWYKASKSSCIS--------K 138

  Fly   475 RCAHECQDLPEGSYRCVCPKGYELSEDQHSCLVQESPCSTEKGVEKCSPGTCLASEDNTSFSCIC 539
            ||.....||....:....||.:            ||||.|..     :||       |:....:|
  Rat   139 RCVSLILDLSLKPHPSHLPKWH------------ESPCGTPD-----APG-------NSIEGFLC 179

  Fly   540 PTGYRSEAFSCQDIDECAEDTHLCSHTCQNTPGGYQCQCP-----EGLNLVEEYTCLAENLC--E 597
            ...::.                :||......||......|     ..|..| .:..:|..:|  |
  Rat   180 KFNFKG----------------MCSPLALGGPGQLTYTTPFQATTSSLKAV-PFASVANVVCGDE 227

  Fly   598 VNNNGCEQICLTARGGVCACREGFRLSADGKSCEDVD-ECLVNNGGCQQVCRNLPGSYGCICAAG 661
            ..:.....:|.....||      |...:.|..|.... .|..|||||||.|              
  Rat   228 AESKTNYYLCKETTAGV------FHWGSSGPLCVSPKFGCSFNNGGCQQDC-------------- 272

  Fly   662 YELLKLDGIRGYCFDIDECSQRTHGCSDQMLCENLNGSYTCLCPPGYALGLDNHIVTSLNSSFIT 726
                                           .|..:||:.|.|.||:.| ||:.:          
  Rat   273 -------------------------------FEGGDGSFRCGCRPGFRL-LDDLV---------- 295

  Fly   727 DSTSSETPSAHTCLDIDECSLANGNCSHFCQNEP--GGFQCACPLGYALSEDMRTCQDIDECLDS 789
                       ||...:.||.........|.:.|  ..:.|.||.||.|......|.|||||.||
  Rat   296 -----------TCASRNPCSSNPCTGGGMCHSVPLSENYTCHCPRGYQLDSSQVHCVDIDECEDS 349

  Fly   790 NGQCSQLCLNQPGGFACACETGFELT-PDGFGCADIDECSQDYGNCSDICINLLGTHACACERGY 853
              .|.|.|:|.||||.|.|..|::.: .....|.|:|||:..|..|:..|.|..|:..|:|:.||
  Rat   350 --PCDQECINTPGGFHCECWVGYQSSGSKEEACEDVDECTAAYSPCAQGCTNTDGSFYCSCKEGY 412

  Fly   854 ELA-KDKLSCLDVDECAGLLSGGCSHECINKAGTFECGCPLGYILNDDGRSCS-----PALVGCP 912
            .:: :|...|.|:|||.|   ..|...|||..|:|.||||.|:.|..:|.||:     ..|...|
  Rat   413 IMSGEDSTQCEDIDECLG---NPCDTLCINTDGSFRCGCPAGFELAPNGVSCTRGSMFSELPARP 474

  Fly   913 PGTQRSADG---CAPIECNPGYTLGSDDKCVDIDECQKQNGGCSHRCSNTEGSFK-----CSCPP 969
            |..:...||   ..|:...||...||.|              .|:|...|:.|.:     .|.|.
  Rat   475 PQKEDKGDGKESTVPLTEMPGSLNGSKD--------------VSNRAQTTDLSIQSDSSTASVPL 525

  Fly   970 GYELDSD-------------------QKTCQDI----DECDQDKTSCITGTCINEIGGFRCEFPK 1011
            ..|:.|:                   |.|.:|.    .:.|.|....:.                
  Rat   526 EIEVSSEASDVWLDLGTYLPTTSGHSQPTHEDSVPAHSDSDTDGQKLLL---------------- 574

  Fly  1012 FPVLPEIPTASSL------------PESPKIELKTPKYPDFTELSNEIPENPKKPAEFDYPEPKF 1064
            |.:|..:...|.|            .::.|.|:|..|..:..:..:.|||.    ||...||.::
  Rat   575 FYILGTVVAISLLLALALGLLIYLKRKAKKEEIKEKKAQNAADSYSWIPER----AESRAPENQY 635

  Fly  1065 PSLP 1068
            ...|
  Rat   636 SPTP 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433
FXa_inhibition 425..458 CDD:291342 11/47 (23%)
FXa_inhibition 476..505 CDD:291342 5/28 (18%)
vWFA <550..586 CDD:294047 6/40 (15%)
FXa_inhibition 596..630 CDD:291342 7/35 (20%)
FXa_inhibition 636..>664 CDD:291342 9/27 (33%)
EGF_CA 676..715 CDD:284955 10/38 (26%)
FXa_inhibition 745..780 CDD:291342 10/36 (28%)
FXa_inhibition 786..821 CDD:291342 14/35 (40%)
FXa_inhibition 827..862 CDD:291342 11/35 (31%)
FXa_inhibition 874..904 CDD:291342 13/29 (45%)
FXa_inhibition 945..980 CDD:291342 9/58 (16%)
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Cd93NP_445835.2 CLECT 30..183 CDD:413318 28/132 (21%)
FXa_inhibition 261..297 CDD:405372 19/102 (19%)
EGF 303..331 CDD:394967 7/27 (26%)
cEGF 323..345 CDD:403760 9/21 (43%)
EGF_CA 342..372 CDD:214542 18/31 (58%)
EGF_CA 382..423 CDD:214542 14/40 (35%)
EGF_CA 424..462 CDD:214542 19/40 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 469..517 15/61 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..643 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24034
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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